Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi803g00001 ATGGCAACTAGACTTCAATTTGAGAATTCTTGTGAAGTTGGAGTCTTCTCTAAACTCACCAATGCCTATTGTTTGGTTGGTATTGGAGGCTCTGAAAACTTCTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATCCCTGTGGTCAAAACCTCCATTGGTGGCACTCGTATTGTTGGTCGTCATTGTATTGGAAACAAGAACGGGCTTCTCTTGCCCCACACCACCGCAGACCAAG 238 0.4496 MATRLQFENSCEVGVFSKLTNAYCLVGIGGSENFYSAFEAELADVIPVVKTSIGGTRIVGRHCIGNKNGLLLPHTTADQ 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi803g00001 79 SUPERFAMILY Pentein 1 79 - -
Sebi803g00001 79 Pfam eIF-6 family 4 79 IPR002769 GO:0042256|GO:0043022
Sebi803g00001 79 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 79 IPR002769 GO:0042256|GO:0043022
Sebi803g00001 79 Gene3D - 1 79 - -
Sebi803g00001 79 SMART eIF6neu2 3 79 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi803g00001 Sebi-Chr803 1269 1973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi803g00001 1 79 Eukaryotic Initiation Factors Gene Family AT3G55620 88.608 1.06e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi803g00001 K03264 - han:110895539 151.369