Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi802g00004 ATGCCTGCCAGGCTGTCCTTAAAGTGTGTTGGGAATGACTCCCATTGCACTGTATTGTACTGTTTACTCTTGAGTCTTGACACCAGTGTTCATATGCACATTTCCACTTGCACAAGTTACAATTTTTTATGCCATGAAATCTTGAGAAGAATTAAGGAACCTAACAAAACTCCAGATTCAGCACGACATAAAAGAGGATGCAATTGCAAGAAATCAAGCTGCCTGAAGAAATATTGTGAATTTTATCAGGGTGGTGTTGGTTGCTCTGTTAGCTGCAGATGTGAAGGGTGCAAGAACACATATGGTAGAAAGGATGGTTCTCCTCCTGCTGAAAGAGTAGCTGAACCTGAAGAAGAAACAAAAGCATATGAAAAGGGTGTAGTGGAAAGAGCTTCACAGAAAACTGAAATTCATAATATCAATGACCATCCAGATTGTGCTCTTCCCACAACACCATCATTGCTTACATTACCCTTTGATGCATCAAAGGGACATCAACCAGGATCTTTTGTTACTACCATCCCCTCTTCTGGGTTGTTTGGTGGCATTGGGAATTCAATTGCTTTTAGAAAAATCCCCCATCAAGTTAGTCTTACTTACCCTGCTGGCTTATGTAGTTTTGACATCAAAGAAGTCCTAAAACTGTCATGA 651 0.404 MPARLSLKCVGNDSHCTVLYCLLLSLDTSVHMHISTCTSYNFLCHEILRRIKEPNKTPDSARHKRGCNCKKSSCLKKYCEFYQGGVGCSVSCRCEGCKNTYGRKDGSPPAERVAEPEEETKAYEKGVVERASQKTEIHNINDHPDCALPTTPSLLTLPFDASKGHQPGSFVTTIPSSGLFGGIGNSIAFRKIPHQVSLTYPAGLCSFDIKEVLKLS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi802g00004 216 ProSiteProfiles CRC domain profile. 1 102 IPR005172 -
Sebi802g00004 216 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 53 155 IPR044522 GO:0003700
Sebi802g00004 216 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 64 100 IPR005172 -
Sebi802g00004 216 SMART CXC_2 62 103 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi802g00004 Sebi-Chr802 33758 35473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi802g00004 47 191 CPP Transcription Factor Family AT3G22780 44.828 2.99e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sebi802g00004 TCR 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi802g00004 - - gmx:100811662 191.045