Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi801g00022 ATGGGGGAAAATCTACCTCCTGGCTTCAGGTTCCATCCTACAGATGAAGAGCTCATCACATGTTATCTTTCAAGGAAAGTGTCTGATACTGCTTTCACTTGTAAAGCTATAGCTGTTGTTGATCTCAACAAATCTGAACCTTGGGACCTCCCAGGTAAGGCCTCAATGGGGGAGAAGGAATGGTATTTCTTCAGCATGAGAGACCGGAAGTATCCAACTGGGCTTCGAACTAATCGAGCCACTGAATCAGGGTATTGGAAAACCACAGGGAAAGACAAGGAAATTTTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTCTTCTATAAGGGTAGAGCTCCAAAGGGTGAAAAAAGCAATTGGGTCATGCACGAATATAGACTCGAAAACAAACATCACTTTAGAACTTCAAAGGATGAATGGGTGGTGTGCAGGGTTTTCCAAAAGAACTTAGCAACCAAAAAACCGCAACAAACATCGTCGTCCCAACCAGAGTCCCCATGTGACACAACCTCAATGGTTAATGAATTTGGAGATGTTGAGCTGCCTAATTTAAATAATATTGCAAATTCATCCGGAAGACTCATTAACATGTTTAATAATGATCTCAGTAATAACAATGTTAACACAAGTATGAACTTGACCATGAATTGGCCAAATATGGCGAGCGCAAGCGGGGTTCCCTCTCTTACATCTTTCCCATGGTCTTCCGGGATGCTGCATCCAAATATTTCTATGAATTCTTTACTTCTCAAGGCCCTACAACTTAGGAACTATCAACAAAAAGAAGTTGTTGCAGTAGCTACAGATCATTTTGGATCATACATGTCTCAAGGAGTTTCCCATGTTGGAACTGATCTAAGTTCAAATCTCACTGCTTCTTCTTCAAAAGTTTTAGAATGCATGCCGCAACATCAACCGGAGCAACCATTCAATTTGGACTCCATCTGGTGA 960 0.4156 MGENLPPGFRFHPTDEELITCYLSRKVSDTAFTCKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSMRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLENKHHFRTSKDEWVVCRVFQKNLATKKPQQTSSSQPESPCDTTSMVNEFGDVELPNLNNIANSSGRLINMFNNDLSNNNVNTSMNLTMNWPNMASASGVPSLTSFPWSSGMLHPNISMNSLLLKALQLRNYQQKEVVAVATDHFGSYMSQGVSHVGTDLSSNLTASSSKVLECMPQHQPEQPFNLDSIW 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi801g00022 319 Gene3D NAC domain 14 154 IPR036093 GO:0003677|GO:0006355
Sebi801g00022 319 FunFam NAC domain-containing protein 100-like 14 155 - -
Sebi801g00022 319 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Sebi801g00022 319 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Sebi801g00022 319 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Sebi801g00022 319 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi801g00022 Sebi-Chr801 325288 330512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi801g00022 1 319 NAC Transcription Factor Family AT3G18400 59.581 1.43e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi801g00022 NAM 3.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi801g00022 - - gmx:100787111 504.982