Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi801g00015 ATGGAACTCCTAAATCAATTCATAGGGATAAACTCACATGTCATGGATAACTCAAACTTGAACATGCAGAACTTGATGCCTTTCTCCTGTGACAGCATCTTGGGCCCTCAAGAACCTGAGTTTCCAGGAAACTTGGAAGAAAATTTTCCTGGTCTTGTCCATCATGTCAATCACAATGCAGTTCCACTTTCCCTTCCAATTTTTCCATCAGAAAATGAAATCCATCAAGGTAAAAAGAGGAAAACAATGGATCTTCCAGAGGCCAGTTCAGCAAACTCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGACAAAACATAGTTCTGGAAGAGGAAAGAGAGCAAAAAGCAATGTAACAGAAGAGGAGAAAGCAAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAATTAAAGTGCTTACAGAATATTGTTCCAGGATGCTACAAGACTATGGGTATGGCTGTAATGTTGGATGAAATCATAAACTATGTCCAGTCTTTGCAGCATCAAGTAGAGTTCCTTTCTTTGAAGCTTACTGCAGCAAGTACCTTTTATGACTTCAATTCAGAGACAGATGCTTTAGAAACAATGCAGAGAGCAAGAGCATCCGAGGCAAAAGAGTTAAACAAGTATAAGAGAGAAGGATATGGAGGAATTTCTTGCTTTCAACCAACTTGGCCTCTTTGA 744 0.4019 MELLNQFIGINSHVMDNSNLNMQNLMPFSCDSILGPQEPEFPGNLEENFPGLVHHVNHNAVPLSLPIFPSENEIHQGKKRKTMDLPEASSANSTPAVSESGSKTKHSSGRGKRAKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELNKYKREGYGGISCFQPTWPL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi801g00015 247 Pfam Helix-loop-helix DNA-binding domain 140 187 IPR011598 GO:0046983
Sebi801g00015 247 Gene3D - 136 198 IPR036638 GO:0046983
Sebi801g00015 247 MobiDBLite consensus disorder prediction 86 104 - -
Sebi801g00015 247 MobiDBLite consensus disorder prediction 76 142 - -
Sebi801g00015 247 FunFam transcription factor BEE 3-like 133 204 - -
Sebi801g00015 247 MobiDBLite consensus disorder prediction 113 142 - -
Sebi801g00015 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 202 IPR036638 GO:0046983
Sebi801g00015 247 CDD bHLH_AtBPE_like 126 211 - -
Sebi801g00015 247 SMART finulus 142 192 IPR011598 GO:0046983
Sebi801g00015 247 Coils Coil 213 233 - -
Sebi801g00015 247 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 76 213 IPR024097 GO:0006355
Sebi801g00015 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 186 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi801g00015 Sebi-Chr801 215340 216836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi801g00015 58 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 56.109 2.35e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi801g00015 HLH 5.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi801g00015 - - gmx:100806942 438.728