Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi801g00014 ATGTGTACTCCTTTAAAGAGTGTCATCTCTTCTAGAGAAGATAATAATGAACTTAGAAGAGGACCTTGGACTCTTGAAGAGGATGATTTGCTCATCAAATACATTGCTAATCATGGAGAAGGAAGATGGAATTTGCTAGCTTTGCATTCAGGATTAAGGAGAACAGGAAAGAGTTGCAGATTAAGATGGCTAAATTATCTAAAGCCAGATATTAAGAGAGGAAATTTAACCTCAGAAGAGCAACTTTTAATTTTTGAACTCCATTCAAAATGGGGCAACAGGTGGTCAAAAATTGCACAACACTTGCCAGGAAGAACAGATAATGAAATAAAAAACTATTGGAGAACAAGGATTCAGAAACAAGCAAGACATTTGAACATTGACACAAACAGAACAGGTTCTCTAGAAATTGTTAAACGTTTAAGGATGATAAGATGCCTTCAGAAAGCAAAAGAATCATCTCCTTCAGCTATGTCAATCCAAAACCAAGCAATTCCTTTGCCTCTTGATGATATTTCTCATTATGCACCAATTGAGACTATACCAACACAAATCCCTTGTCAGGGAGCTTGTGTGAATGAAGGAGGTCCTAATTTTTTGTACCAGCATGAGCAGAACTCAGACTCTGAGCACAACAATAGTTCATGCATATCCTCTTCAGAATCAGCAAATATGTCAAACAATAACATGACTCAACCTTTGGAATGTCAATTTCAGGGCTTAAATAACAGTGACTTTGGCATCTATGTATATGATGGTTACCAAATTAATAACAATGTTAATGAGACTGGTGCTTTCAACCAGACAATGATTGATGAGGATCTGGAATACACAATGGGTGATTACCAGATATCAGAAAGCAATTGGCTAGACAAGGAATTTTCATACATGAATGATCTGTGGCAAATTAGGAACATACAAAATTAA 927 0.3614 MCTPLKSVISSREDNNELRRGPWTLEEDDLLIKYIANHGEGRWNLLALHSGLRRTGKSCRLRWLNYLKPDIKRGNLTSEEQLLIFELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLNIDTNRTGSLEIVKRLRMIRCLQKAKESSPSAMSIQNQAIPLPLDDISHYAPIETIPTQIPCQGACVNEGGPNFLYQHEQNSDSEHNNSSCISSSESANMSNNNMTQPLECQFQGLNNSDFGIYVYDGYQINNNVNETGAFNQTMIDEDLEYTMGDYQISESNWLDKEFSYMNDLWQIRNIQN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi801g00014 308 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Sebi801g00014 308 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Sebi801g00014 308 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Sebi801g00014 308 SMART sant 72 120 IPR001005 -
Sebi801g00014 308 SMART sant 19 69 IPR001005 -
Sebi801g00014 308 MobiDBLite consensus disorder prediction 202 224 - -
Sebi801g00014 308 CDD SANT 77 116 IPR001005 -
Sebi801g00014 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 71 IPR017930 -
Sebi801g00014 308 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Sebi801g00014 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Sebi801g00014 308 Gene3D - 20 72 - -
Sebi801g00014 308 Gene3D - 77 119 - -
Sebi801g00014 308 CDD SANT 22 67 IPR001005 -
Sebi801g00014 308 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 227 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi801g00014 308 FunFam MYB transcription factor 76 118 - -
Sebi801g00014 308 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Sebi801g00014 308 FunFam Myb transcription factor 20 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi801g00014 Sebi-Chr801 200500 201599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi801g00014 15 261 MYB Transcription Factor Family AT1G68320 47.036 2.03e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi801g00014 Myb_DNA-binding 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi801g00014 K09422 - gmx:778042 367.851