Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi801g00010 ATGTACACATCAAGGAAGAAAATTCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAATCAGTTGGACAGGCATTGTTTGATCTAGAAAACACCAACCATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCAGTCCAAATTGATGTTTCTGGCAACCGTAAGGCCGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGTTTCCGCAAGATTCATGTCAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGTGGCAAGGATGTAATCTTGGTTGCCACCCGGAGGATATTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCACCCGTACACTCACTGCTGTGCATGAGGCAATGCTGGAGGATATTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTTAGGTATCGAGTTGATGGATCCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGCGAAACAATACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAATTTTCGGGCAAAGATGTTGTGTTTGAGTATCCAATTACTGAGGCTTAG 576 0.4358 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNHELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAVQRPRTRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi801g00010 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sebi801g00010 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sebi801g00010 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi801g00010 Sebi-Chr801 149971 151264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi801g00010 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 7.37e-114 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi801g00010 K02993 - gmx:100499757 367.466