Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi800g00019 ATGACGGTTTCTTCCTTCTTCAACAGAGTATCCAGAGCTCTCAACAGCCACCATTACTACTCCAAACTTGTGCTTCTCTGCACTCTCAGTGGTGGAGGTGTGGTGGCATACTCTGAATTACAATCAGAAGCTGAACGCCCTAGTGTTGATGCTAATGAGCCCTTGAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGGTCTAGATGCTTCATTATATGATGTTCAGGTTGTTTCGCCTCTAGGAGCACAAGTAAACACTTTTAACACCCCCGGTGTCAAGGAGAACTGTCATTTTCTAAAGGATGTTGAGGATGCTCAGAAGATCAGACTGTCTGTGATAGATTGTTTTGAGAAAGCTGTTCTTCCTAGTCTATCTGAAGAAGAGCGAAGGTCAAATCTTCATTTTGTAATTGTCGGAGGAGGTCCAACTGGTGTTGAATTTGCTGCAGAGCTGCATGATTATGTCCAAGAAGATTTAATCAAATTATATCCAACCGTGAAAGATATAGTGAAGATAACATTGATTCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCTGAGCAGAAGTTTACGAGAGATGGTATAGAAGTTCAAACAGGATGCCGAGTTGTCAATGTTAATGACAAGGAAATTACAGTGAAGGTGAAATCAACAGGAGAGGTTTGCTCTGTGCCCCATGGATTGATTGTTTGGTCGACTGGCATTGCAACTCTTCCAGTTATAAGGGACTTAATGGAAGAAATTGGTCAGGCTAAAAGGCATGTACTAGCAACGGATGAATGGTTGCGAGTGAAGGGATGCGGAGATGTATATGCTATTGGTGATTGTTCTACAATCATTCAACGTAAAATCATGGATGATATCTCAGATGTATTTAAGGCTGCAGACAAAAATAACTCTGGTACCTTGACTGTTGAAGAATTCAAGGATGTGATGGATGACATTATCTTAAGATACCCACAAGTTGAACACTATCTGAAGAGTAAACATCTACTTGATTTGAGCATAATGTGGAAAGATTCACAAGGGAATGAAAGAAAAGAAATAGACATAGAAGGATTTAAGCTGGGCCTTTCTCATGTAGATTCACAGATGAAGAGTCTACCAGCAACTGCACAGGTTGCTGCCCAGCAAGGTGCATATCTAGCTCAATGCTTTAATCGCATGGATCATTGTCAAGAGCATCCTGAAGGTCCTCGACGATTTACAGGATCTGGACGTCATAATTTTCTTCCCTTCCGGTATAAACATTTTGGGCAATTTGCTCCACTGGGTGGGGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCTATTGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGTTTCTGGTCATATCTGATTGGACAAGAAGATTCATATTTGGGAGGGATTCAAGCCGAGTTTAA 1494 0.4177 MTVSSFFNRVSRALNSHHYYSKLVLLCTLSGGGVVAYSELQSEAERPSVDANEPLKKKVVVLGTGWAATSFLKGLDASLYDVQVVSPLGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSLSEEERRSNLHFVIVGGGPTGVEFAAELHDYVQEDLIKLYPTVKDIVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVQTGCRVVNVNDKEITVKVKSTGEVCSVPHGLIVWSTGIATLPVIRDLMEEIGQAKRHVLATDEWLRVKGCGDVYAIGDCSTIIQRKIMDDISDVFKAADKNNSGTLTVEEFKDVMDDIILRYPQVEHYLKSKHLLDLSIMWKDSQGNERKEIDIEGFKLGLSHVDSQMKSLPATAQVAAQQGAYLAQCFNRMDHCQEHPEGPRRFTGSGRHNFLPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRFLVISDWTRRFIFGRDSSRV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi800g00019 497 SMART efh_1 302 330 IPR002048 GO:0005509
Sebi800g00019 497 ProSiteProfiles EF-hand calcium-binding domain profile. 298 333 IPR002048 GO:0005509
Sebi800g00019 497 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 344 496 - -
Sebi800g00019 497 SUPERFAMILY FAD/NAD(P)-binding domain 137 295 IPR036188 -
Sebi800g00019 497 Pfam EF hand 303 328 IPR002048 GO:0005509
Sebi800g00019 497 ProSitePatterns EF-hand calcium-binding domain. 311 323 IPR018247 -
Sebi800g00019 497 Gene3D - 89 321 - -
Sebi800g00019 497 Gene3D - 363 497 - -
Sebi800g00019 497 Gene3D - 47 88 - -
Sebi800g00019 497 SUPERFAMILY EF-hand 255 384 IPR011992 -
Sebi800g00019 497 Pfam Pyridine nucleotide-disulphide oxidoreductase 88 295 IPR023753 GO:0016491
Sebi800g00019 497 PANTHER NADH DEHYDROGENASE 88 497 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi800g00019 Sebi-Chr800 328006 334209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi800g00019 1 87 Chloroplast and Mitochondria Gene Families AT4G21490 43.678 3.00e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi800g00019 K03885 - gmx:100793566 753.436