Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi800g00017 ATGGAGGATCCACACAACTACAAGGATGATGAGCTAGTCTTAGGACACCGACTTTCTCAATCAGCAAATAGTCATATGGAACCTAAATTTCAGAATTTTACATCTGAGAGACAGGGTGATTCAATTTCTATTCCAATGAACAGTATATGTTGTCATGGGAATGACACCAATATTTTGGGATACTGTAATTCTTTATTGAATGAAAGAAGAACAGTTACAGAGGCAAATGGCAATGTTAATAGCTATTTTCAGCAAAATCAAGGTGCGAGTAGGTGGGAAAGGTCAGGGAAGTTTTCTTCTGTAAATGGAGGAAACAGGAATGGTTGGTTAGGTGACAAAAATTCTGTTAAAAATGGCCACTTATCTGGGGTGGTGGGAATGCGATATGATTCTTATAGTACAACCTGCCCAAGACATTGTGATCACAGAGCAAATCAAGCAACCAACTCTAAAATTTTGCATTTAGTTAATCCTCAGTTCCATAACATTCATAATGGGGATGCTAAAAGCTTGGTTACAAGAATATCCTCATTTCTATGCTTGCATATTCCTGGAGTCATAAGCCCTCATGCTGAAGCTGTACAGCAGTGGAACAGATTTTTTGTCATTGCTTGTTTAGTGGCAATTTTTGTTGATCCGTTGTTTTTCTTCATGCTATCAGCAATAAAGGACAGTAAATGCATAGTTATTGATTCAGCCACTAGTCCCACTACAATAGCAATTGTAATTTTTAGAAGCATGACCGATGTTATATACTTCTTGCACATACTTCTCCAGTTTAGGTTGGCTTTTGTGGCTCCTGAGTCTAGAGTGGTTGGTGCAGGAGAGGTGGTTGAACATCCAAAAAAAATTGCACTCAATTACCTTAGTGGCTACTTTCTCATTGATATATTTAATGTAATGCCAGTTCCTCAGAGAGTTAACCAATGCCTTCGAGATGCTTGCCATAGCTCCAACTTTGAGTCATGCATGAGGTTCATAGATTGTGGGAATGGGAATGCTAGAGACAGTTTCCTTGTTGATCCAATGTGGAGTATATGGATAAATGATGCCAATGGTAGTGCTTGTTTTCAGAAAGATGGTTTCCCATATGGAATTTATTCTGAAGCTGTTGGTCTTACCACTATAAATGATAGACCGTTTACTAAAAATATGTCTATTCATTGTTTTGGGGATTCCAGCACTCTAGCTGGAAATCTAGTTCCAAGCAACTTCATTTGGGAGGTTCTTTTCACCATGGCTATTATTGGGCTAGGCCTTTTGCTCTTTGCTCTCCTCATAGGAAATATGCAGAACTTTCTTCAGGCTCTTGGACAGAGGAGATTGGAAATGTCATTAAGACAACGGGATTATGAGCAGTGGATGAGCCATCGATGCTTGCCAGAAGAACTAAGAAGGCAAGTGAGGAATGCTGAACGGTACAACTGGGTTGCCACCAGAGGGGTAAATGAAGAAATGCTTTTGGAGAATCTGCCTGAAGAACTTCAAAGAGATATAAGACGCCATCTCTTCAAATTTGTGAAGAAGGTTCGGATATTTTCCATGATGGATGATCAAGTCATTGATGCTATTTGTGAGAGACTAAAGCTGAAGATATTCATTGAAGAAAGCAAAATTCTGTATCCTGGTGGTCCAATTGACAAGATGATTTTTATTATACGAGGAAAAGTGGAGAGCATTGAAGATAAAACCACAATTTGCTTATCTGAGGGGGATTTTTGTGGCGAGGAACTTCTCACATGGTGCCTAGAGCATTATTCAGTAAATAGAAATGGGAGAAAAGTAAGGATTACAGGACAGAGACTGCTAAGCAACAGAACAGTTAGATGCTTAACTAATGTGGAAGCATTTGTACTTCAAGTTTCAGATCTTGAAGGGGTCACTAGTCTTTATGCTAGATTTTTGCGGAATCAACATGTTCAAGGAGCTATCAGGTGA 1938 0.3911 MEDPHNYKDDELVLGHRLSQSANSHMEPKFQNFTSERQGDSISIPMNSICCHGNDTNILGYCNSLLNERRTVTEANGNVNSYFQQNQGASRWERSGKFSSVNGGNRNGWLGDKNSVKNGHLSGVVGMRYDSYSTTCPRHCDHRANQATNSKILHLVNPQFHNIHNGDAKSLVTRISSFLCLHIPGVISPHAEAVQQWNRFFVIACLVAIFVDPLFFFMLSAIKDSKCIVIDSATSPTTIAIVIFRSMTDVIYFLHILLQFRLAFVAPESRVVGAGEVVEHPKKIALNYLSGYFLIDIFNVMPVPQRVNQCLRDACHSSNFESCMRFIDCGNGNARDSFLVDPMWSIWINDANGSACFQKDGFPYGIYSEAVGLTTINDRPFTKNMSIHCFGDSSTLAGNLVPSNFIWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGQRRLEMSLRQRDYEQWMSHRCLPEELRRQVRNAERYNWVATRGVNEEMLLENLPEELQRDIRRHLFKFVKKVRIFSMMDDQVIDAICERLKLKIFIEESKILYPGGPIDKMIFIIRGKVESIEDKTTICLSEGDFCGEELLTWCLEHYSVNRNGRKVRITGQRLLSNRTVRCLTNVEAFVLQVSDLEGVTSLYARFLRNQHVQGAIR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi800g00017 645 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 305 637 - -
Sebi800g00017 645 SUPERFAMILY Voltage-gated potassium channels 194 440 - -
Sebi800g00017 645 SUPERFAMILY cAMP-binding domain-like 440 635 IPR018490 -
Sebi800g00017 645 ProSiteProfiles cAMP/cGMP binding motif profile. 512 579 IPR000595 -
Sebi800g00017 645 CDD CAP_ED 512 625 IPR000595 -
Sebi800g00017 645 Gene3D Helix hairpin bin 429 504 - -
Sebi800g00017 645 Gene3D Jelly Rolls 510 633 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi800g00017 Sebi-Chr800 261119 268727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi800g00017 305 589 Ion Channels AT3G17700 63.194 8.83e-103 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi800g00017 K05391 - oeu:111402769 606.29