Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00147 ATGACGTTAGTGTCCCAAAGTGGAAGGTTTGAACTCGGTTTCTTCACTCCCGGTAACTCTAACAAAACTTACCTGGGTATTTGGTACAAGAATATCCCTGTTGAGAGAGTTGTTTGGGTTGCAAACAGAGTCAGCCCCATCAATGGTTCAAACCCAATCTTAACCGTTAACAGCACAGGCAGCCTCGTCCTCAGCCAAGACGGCACCGTTGTTTGGTATACAGCCTCTCAAAAGCAAGAACAGAATCCAGTGGCAGTGCTCTTGGACAGTGGCAATCTTGTGGGAACACAGACGTTCTACCGCTTTGGACCATGGAATGGCCTATATTTTAGTGGAATACCAGTACAACAACCCACCAACTCCTTTTTTAATTTCGAGTATGTTTCCAACAAAGAGGAGATCTTCTTCGATTATAGCCTCAAAAACAATTCTGTCATCTCAGTAGTAGTACTAAACCAAACCACTCTTTATCGCTATGTATGGGACGAACAAGATCACGGTTGGAGGACTTATACATCAGTCCCCAAAGACTATTGTGACACATATGGCCTTTGTGGAGCCTATGGAAATTGCATAATTAGGGAGGCACAAGTGTGTCAATGTTTGAATGGGTTCAGTCCAAAGTCACCACAAGCATGGAGCATATCGGATTGGACTCAAGGTTGTGTCCGCGATGAACCGTTAAGTAGCTGCAACGACACACACAAGGATGGGTTTGTCAAATTTGAAGGCCTCAAAGTTCCAGATACAACACATACCTGGTTAGATGAAAGTATGGGTCTTGAGGAATGCAGAAACAAGTGCTTGAATAATTGCTCTTGTATGGCTTATGCAAATTCAAACATCAGTGGAGCAGGTAGTGGCTGTGTCATGTGGTTCGGCGATCTAATTGACATGAGACAATTTGAAGATGATGGGCAAGTTCTTTATATCCGTATGGCTGCTGGTTCGGAAATAGTCAACCATGAAGAGCCTGCACACGGGCACAACAAAAGGGTGACAGAAATAATTGCTACAACCGTTGCTGCAATTTCTGGGATGCTTATACTTTCCATTTATGTCATATACAGAGTCCGAAGGAAAATTGCAGATAAGTCAAAGATAGAAGATAACATTGAAGGACATCTAGATGAGCTAGATTTGCCATTATTCGATCTGCTAACAATTACTACTGCCACTCACAACTTCTTGTTGAATAATAAGATTGGACAAGGTGGTTTTGGATCTGTATATAAGGGGAAATTAGCAGATGGACAAGAAATTGCTGTAAAGAGACTTTCAAGTAGTTCCAGACAAGGAATTTCTGAGTTCTTAACAGAAGTCAAACTAATAGCAAAACTTCAACACAGAAATCTTGTAAAGCTTCTTGGTTGCTGTATTCGAGGAGAAGAAAAATTGCTAGTATATGAATTTATGGCTAATGGTAGCCTTGACTCCTTTATTTTTGGTAAGGAACATGAAGCATGCTTAGATCAAATAAAAGGTAAATTGCTGGAGTGGCCCCAACGCTTCCACATAATATTTGGAGTTGCTAGAGGGCTTTTGTATCTTCATCAAGATTCACGATTAAGAATCATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTCGATGATAAGTTAAACCCAAAAATATCAGATTTTGGAATGGCCAGATCTTTTGGAGGAGACCAGATTGAAGGAAACACAAATAGAATAGTTAGGACTTATGGATACATGGCACCAGAGTATGCTGCTGATGGGTTATTTTCAATAAAATCTGATGTTTTCAGCTTTGGTATTTTATTGTTGGAGATTATATGTGGGAACAAAAATAGAACCCTTTGTCATAGAAACCAGACTCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAGGAGGGAAACACTTTACAATTGATTGACTCAAGAATAAAGGATTCTTATGTTGTCTTAGAAGTATTGCGATGCATCCATGTTTGTCTCTTATGCGTGCAGCAATATCCAGAGGATAGACCAACCATGACCTCAGTAGTACAAATGTTAGGTAGTGAAAGGAAACTGGTTGACCCCAAAGAGCCTGGGTTCTTCCCAAGGAATGTTTCTGATGGAGGAATTTCAAGCTCAAATCAAAATGAAATGAGTACAAATGATGAATTAACCGTTACCTCCTTAAATGGCCGATGA 2166 0.4021 MTLVSQSGRFELGFFTPGNSNKTYLGIWYKNIPVERVVWVANRVSPINGSNPILTVNSTGSLVLSQDGTVVWYTASQKQEQNPVAVLLDSGNLVGTQTFYRFGPWNGLYFSGIPVQQPTNSFFNFEYVSNKEEIFFDYSLKNNSVISVVVLNQTTLYRYVWDEQDHGWRTYTSVPKDYCDTYGLCGAYGNCIIREAQVCQCLNGFSPKSPQAWSISDWTQGCVRDEPLSSCNDTHKDGFVKFEGLKVPDTTHTWLDESMGLEECRNKCLNNCSCMAYANSNISGAGSGCVMWFGDLIDMRQFEDDGQVLYIRMAAGSEIVNHEEPAHGHNKRVTEIIATTVAAISGMLILSIYVIYRVRRKIADKSKIEDNIEGHLDELDLPLFDLLTITTATHNFLLNNKIGQGGFGSVYKGKLADGQEIAVKRLSSSSRQGISEFLTEVKLIAKLQHRNLVKLLGCCIRGEEKLLVYEFMANGSLDSFIFGKEHEACLDQIKGKLLEWPQRFHIIFGVARGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARSFGGDQIEGNTNRIVRTYGYMAPEYAADGLFSIKSDVFSFGILLLEIICGNKNRTLCHRNQTLNLVGYAWTLWKEGNTLQLIDSRIKDSYVVLEVLRCIHVCLLCVQQYPEDRPTMTSVVQMLGSERKLVDPKEPGFFPRNVSDGGISSSNQNEMSTNDELTVTSLNGR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00147 721 Gene3D - 1 100 IPR036426 -
Sebi7g00147 721 CDD B_lectin 2 94 IPR001480 -
Sebi7g00147 721 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Sebi7g00147 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Sebi7g00147 721 Pfam D-mannose binding lectin 37 94 IPR001480 -
Sebi7g00147 721 Pfam S-locus glycoprotein domain 100 209 IPR000858 GO:0048544
Sebi7g00147 721 PIRSF SRK 95 721 IPR024171 GO:0004674
Sebi7g00147 721 PIRSF SRK 1 99 IPR024171 GO:0004674
Sebi7g00147 721 SMART serkin_6 396 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi7g00147 721 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 94 - -
Sebi7g00147 721 Pfam Protein tyrosine and serine/threonine kinase 398 675 IPR001245 GO:0004672|GO:0006468
Sebi7g00147 721 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 683 - -
Sebi7g00147 721 SMART ntp_6 234 313 IPR003609 -
Sebi7g00147 721 SMART blect_4 2 102 IPR001480 -
Sebi7g00147 721 ProSiteProfiles EGF-like domain profile. 175 211 IPR000742 -
Sebi7g00147 721 Gene3D Transferase(Phosphotransferase) domain 1 472 685 - -
Sebi7g00147 721 MobiDBLite consensus disorder prediction 684 721 - -
Sebi7g00147 721 FunFam receptor-like serine/threonine-protein kinase SD1-8 367 471 - -
Sebi7g00147 721 ProSiteProfiles Bulb-type lectin domain profile. 1 108 IPR001480 -
Sebi7g00147 721 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 230 313 - -
Sebi7g00147 721 SUPERFAMILY Protein kinase-like (PK-like) 379 675 IPR011009 -
Sebi7g00147 721 CDD PAN_AP_plant 229 314 - -
Sebi7g00147 721 CDD STKc_IRAK 402 675 - -
Sebi7g00147 721 Pfam PAN-like domain 231 299 IPR003609 -
Sebi7g00147 721 ProSiteProfiles PAN/Apple domain profile. 231 315 IPR003609 -
Sebi7g00147 721 SUPERFAMILY alpha-D-mannose-specific plant lectins 23 94 IPR036426 -
Sebi7g00147 721 Gene3D Phosphorylase Kinase; domain 1 357 471 - -
Sebi7g00147 721 MobiDBLite consensus disorder prediction 695 721 - -
Sebi7g00147 721 ProSiteProfiles Protein kinase domain profile. 396 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00147 Sebi-Chr7 3461076 3464918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00147 321 693 Receptor kinase-like Gene Family AT4G23190 49.081 1.05e-118 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi7g00147 PK_Tyr_Ser-Thr 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00147 - - gmx:100812007 918.687