Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00139 ATGGAGTTTCTTCATTCTTCAATGAGTATCATTGCTTGTATTCTACTTGTCTCTTCTCTTATAGTAGTTTCCATAGCGGGCGAGACATCATCCATTTCTCTGTCCCAGTCCATCAATGATGGAAAGACCATAGTTTCCCACAATGGAATCTTTGAACTTGGTTTCTTCAGTCTTGGAAATCCCAAAAGATACTACCTTGGAATTTGGTTCAAGAACATTCCAGTCCAAAACATTGTTTGGGTTGCAAACGGTGGCCAACCAATCAATGACTCCTCTGCCATCTTGAAACTAGACAGTTCAGGCAATCTGGTCCTTACTCACAACAACGAAATCGTTTGGGTGACAAATTCTTCTAGAAAAGCAGAGAAGCCAGAGGCAGAACTCTTGGATTCTGGAAATCTTGTGATAAGAGATGAGAATGAGAAGAGTAAAAATTATCTTTGGGAAAGCTTTGACTACCTATCTAATACAATGTTGCCAGGGATGAAGGTAGGATGGGATCTCAAGAGAAATCTGAATAGGCGTCTCAGAGCATGGAAGAGTGATGATGATCCAACCCCAGGGGATCTTACTTGGGGTTTCGTTCTGCATCCCTATCCTGAAATCTATATGATGAATGGAGAAACAAAGCACCACAGACTTGGTCCATGGAATGGCTTGCGTTTTAGTGGCATGCCAGAGCTGAAGCCTAATTCCCTTTTTAACTACAATTATGTCTCTGATGAGGAAGAGGTTAGTTACACATGGAGCCTCAAGGATAATTCTCTAATATCAAAAGTGATACTTAACCAATCCACTCATGAACGTCCTCGCTATGTATGGTCAAAGATTGATAAATCATGGAATCTTCATTCAACAATGCCAGCAGACATCTGTGATAATTATGGCCGATGTGGACCCAATGGATATTGCTGCATTACTAATTCACCAATGTGTGACTGTTTAAGAGGGTTCAAGCCTAAGTCTCCTGAAGCATGGAAGTCAATGGATTGGTCGCAAGGGTGTGTCCGGAATCCTCCATTAAACTGCAAAGATGATGGGTTTCTCCCAGTGGATGGCTTGAAATTGCCAGATACTAGTAATACTTCAGTGGTTGAGACTATGAATCTACTGCAATGTAAAGCCAAATGCTTGAATAATTGTACTTGCATGGCCTATACACATTCAAATATAAGCGGAGAAGGGAGTGGTTGTGTTATGTGGTTTGGTGATCTAATTGATATCAAAAAGTTTCCAGATGGTGGGCAGATTCTATATATACGGATGCCTGCTTCAGAATTAGGGGACGGGAACAAGTGGAACTCGAGAATATTTTTTGTAACTGCTGCCTCTGTAGCTTCGGGAATGTTTTTACTTGCAATTTATTTTATCATCAGATTCCAGAGGAGCAATGTTACTGAGAACTCAAATGAAAGACATGTGGATCATTTAGATCTCCCATTGTTTGATTTCCAAACAATTATTATTGCCACTGACAACTTCTCAGAGAAGAACAAGATTGGAGAAGGTGGTTTTGGACCTGTATATTGGGGGAAATTAGCGGATGGGCTAGAAATTGCTGTAAAGAGACTTTCACAGAGCTCGGGACAAGGGATGAGTGAGTTCATAAATGAAGTAAAACTTATCGCAAATCTTCAACATCGAAATCTTGTAAAGCTTCTTGGTTGTTGCTTACAGAGACATGAAAAAATGCTTATTTATGAATACATGGTTAATGGCAGCCTAGACTACTTCATTTTCGATCATACCAAAGGTAAAGTTCTTGATTGGCCAAAGCGTTTCCACATAATTTGTGGAATTGCTCGAGGGCTTATGTATCTTCATCAAGATTCTCGACTGAGGATTGTCCATAGAGATCTCAAAGCAAGTAATGTTTTACTAGATGATACTTTGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATTTTTGGAGGAGAGCAAATTGAAGGAAACACAGATAAAATAGTTGGGACATATGGGTATATGGCACCAGAGTATGCTGTTGATGGGCAATTTTCAGTAAAATCTGATGTTTTCAGTTTTGGAATTTTACTATTGGAGATTATATGTGGGAAGAAAAATAGAGGACATTATCGTACAAAGCAAACCTATAACCTTGTCAATTATGTATGGACGTTTTGGAAAATAGGCAGTACTTTAAAAATAATTGACTCAAACATAGAGGATTCATGCATTGAATCTGAAGCATTACGTTGCATTCATGTTGGACTCTTGTGTGTGCAACAATACCCGGAGGATAGGCCTACCATGACTGATGTGATTTTAATGTTAAGGAGTGAGATGAAATTGGATGAACCTAAAGAGCCAGGTTATTTTACGAAGAAGGATTCTATTGAAGCAACTTCAACCTCAAGTGGGAAGGATTCAAGTTCAAATAATGAAATGACAATAACCTTAAGTGTACATTGA 2433 0.3896 MEFLHSSMSIIACILLVSSLIVVSIAGETSSISLSQSINDGKTIVSHNGIFELGFFSLGNPKRYYLGIWFKNIPVQNIVWVANGGQPINDSSAILKLDSSGNLVLTHNNEIVWVTNSSRKAEKPEAELLDSGNLVIRDENEKSKNYLWESFDYLSNTMLPGMKVGWDLKRNLNRRLRAWKSDDDPTPGDLTWGFVLHPYPEIYMMNGETKHHRLGPWNGLRFSGMPELKPNSLFNYNYVSDEEEVSYTWSLKDNSLISKVILNQSTHERPRYVWSKIDKSWNLHSTMPADICDNYGRCGPNGYCCITNSPMCDCLRGFKPKSPEAWKSMDWSQGCVRNPPLNCKDDGFLPVDGLKLPDTSNTSVVETMNLLQCKAKCLNNCTCMAYTHSNISGEGSGCVMWFGDLIDIKKFPDGGQILYIRMPASELGDGNKWNSRIFFVTAASVASGMFLLAIYFIIRFQRSNVTENSNERHVDHLDLPLFDFQTIIIATDNFSEKNKIGEGGFGPVYWGKLADGLEIAVKRLSQSSGQGMSEFINEVKLIANLQHRNLVKLLGCCLQRHEKMLIYEYMVNGSLDYFIFDHTKGKVLDWPKRFHIICGIARGLMYLHQDSRLRIVHRDLKASNVLLDDTLNPKISDFGMARIFGGEQIEGNTDKIVGTYGYMAPEYAVDGQFSVKSDVFSFGILLLEIICGKKNRGHYRTKQTYNLVNYVWTFWKIGSTLKIIDSNIEDSCIESEALRCIHVGLLCVQQYPEDRPTMTDVILMLRSEMKLDEPKEPGYFTKKDSIEATSTSSGKDSSSNNEMTITLSVH 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00139 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Sebi7g00139 810 SUPERFAMILY Protein kinase-like (PK-like) 479 780 IPR011009 -
Sebi7g00139 810 MobiDBLite consensus disorder prediction 775 810 - -
Sebi7g00139 810 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Sebi7g00139 810 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 756 - -
Sebi7g00139 810 MobiDBLite consensus disorder prediction 784 810 - -
Sebi7g00139 810 ProSiteProfiles Protein kinase domain profile. 494 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi7g00139 810 CDD PAN_AP_plant 339 423 - -
Sebi7g00139 810 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Sebi7g00139 810 Pfam Domain of unknown function (DUF3403) 768 807 IPR021820 GO:0004674
Sebi7g00139 810 SMART serkin_6 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi7g00139 810 Pfam D-mannose binding lectin 78 180 IPR001480 -
Sebi7g00139 810 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Sebi7g00139 810 Pfam Protein tyrosine and serine/threonine kinase 497 762 IPR001245 GO:0004672|GO:0006468
Sebi7g00139 810 CDD B_lectin 35 153 IPR001480 -
Sebi7g00139 810 SMART ntp_6 343 422 IPR003609 -
Sebi7g00139 810 Pfam PAN-like domain 343 408 IPR003609 -
Sebi7g00139 810 Gene3D Transferase(Phosphotransferase) domain 1 570 784 - -
Sebi7g00139 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Sebi7g00139 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Sebi7g00139 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
Sebi7g00139 810 Gene3D - 24 151 IPR036426 -
Sebi7g00139 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 773 - -
Sebi7g00139 810 SMART blect_4 35 154 IPR001480 -
Sebi7g00139 810 Gene3D Phosphorylase Kinase; domain 1 457 569 - -
Sebi7g00139 810 FunFam receptor-like serine/threonine-protein kinase SD1-8 466 569 - -
Sebi7g00139 810 CDD STKc_IRAK 500 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00139 Sebi-Chr7 3217652 3221524 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00139 437 796 Receptor kinase-like Gene Family AT4G23190 51.093 1.99e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi7g00139 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00139 - - gmx:100808807 1137.09