Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00093 ATGGGAATTCAGAAATATATGGTTGCCGTGAAGTTTAGCTTTTGTGTTCTTTTGATTGTTCTTCTTGTAGCAGCAGTAAGCTTTATAGAAAAGAAGGAAACACATGATGAGTTTGTTAGCGAACTACTTGATTCACCATCTGGATTGTTTGATGAGCACACGGCAAAGGTACTATGGAGTACTTGCTGGGAAGATTCAATTCGTTTAAAGAAAGAGGTTGAAGATCATGATTTACGCCTCCCTCAGGAATCATCTGGTAGCACCAATAGAATTAGTTCAGAGACTCAACCATTTGTGCGAGCAGACATCCAAAAATTGATTGCTTGCCATCCTCAGTTCAAGGAAAACTTTATTCAGTGTTGGAGAAAAAATAATCTTCCATTTCATGTATCAGGAGAAGAGGATGATTTCAAGATATGGCATGTCACTTATATGGGATCACTTTTTTCGAAATCCAGTGTTCCACGAAGAAATTTGGGTCGAGTTTTGCTTCAGCACATATCAGAACCACCTAGTCCAGGTCCTAAACCTCTGCATCCTCCTTTGTCACCAACCCCATTTTTCCCAAAACTGACACCACCAGCAATTGCAGATATTTCCTCTCCTCCATCTCCTGTCATTAACAAACAAGAAGATAAGCATAGTAACAGAAGAACAGTTGTTATTGCTGTAGTTATAACTGCATTGGTGACATTCATAGCTGCAGCATTGTTCTTTTTATACTGTAGTGGGTTTTGTAAGACGGGCCGAGTTAGGAAAAATGATGAGAGGCCCCTTCTCAGCTTGAGCATGAGCGACTTTTCTGTTGGTCCTTCCAATTATTCTTTTGGAAATTCAATAAAAGGGGAGAAAGTTGGGTTTCAGTCATCAAATGATAATTTACTAGACAACAAGAAGACCTCAGTGCAAGAAAGTCAATCAATAGGAGCTCTTACTGCTGCCGGATCACCATTTGAACTGAAACCTCCTCCTGGGAGAGTGGGAACCATACCTTCTGGAATGCCTCCTTTAAAACCTCCTCCTGGAAGGCTGAATCCTCTTCCCCCTGAACCACCTTCATTTAGGCCTTCTGGTCCTCCTCGACCTCCTCCTCCAATTGGCCCTAAGGTAGCTCGGCCTTTAGCAAATGTTGAGGCTGGGGCAGAAGGTGAAGCTGGTGCTCCTAAAGCCAAGCTAAAGCCTTTCTTCTGGGATAAGGTTCAAGCTAACTCAGATCATTCAATGGTTTGGAATCAGATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGCTATAATGCTGTGGATAAAAACAACGGTCAACGGCAGAAAGAGTCTACCTCCCAAGACCCTTCACCTCAATATATCCAGATCATTGACAAAAAGAAATCGCAAAATTTATTAATTTTATTGCGAGCATTGAACGTGACAATGGAAGAAGTTTGTGATGCACTTTATGAAGGAAATGAGCTACCCTCAGAATTCCTTCAAACCTTGCTGAAGATGGCACCAACATCAGATGAAGAACTTAAGCTTAGACTTTTTAGTGGTGAACTGTCTCAACTTGGGCCTGCAGACCGATTCCTGAAAGCCTTGGTTGACATTCCGTTTGCCTTTAAGCGAATGGAAGCACTGCTTTTCATGAGTACACTTAATGAGGAGCTCACTACTACTATGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCAGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGTATGAATGATGGAACATACCGTGGTGGTGCACAAGCATTTAAACTTGATACACTTTTAAAATTATCTGATGTAAAAGGAACAGATGGCAAAACCACACTCTTACACTTTGTTGTTCAGGAGATTATCCGCTCTGAGGGCATAAAAGCTGCTCGAGCTGCAAAAGAGAGCAAGAGTTCATCTAGTATTAAAACAGATGAAACAGAAGATCACTACCGTGAAATTGGTCTTCAGGTGGTTTCACACTTGAGCAGTGAGCTTGAGAATGTTAAAAAAGCAGCAGTTCTAGATGCTGACAGCTTAACAGCAACTGCTTCCAAACTTGCTCATGGTCTCATAAAAACCAAAAACTTGGTAAATGAAAACATGAAAAATGTGGAGGAAGATAGAGGGTTTTGTGAGACAACAAAAAGTTTTGTGCAGAATGCTGAGGTTGATGTTATGAAACTGATGGAAGAAGAGAAGAAAATCATGGCTCTGGTGAAGAGCACTGGTGATTACTTTCATGGGAATGCTGGGAAGGATGAAGGCTTAAGATTGTTTGTAGTAGTAAGAGACTTCATAATAATGCTGGATAAGGTATGCAAGGAAGTGAGAGAAGCACAGAAGAGAGCAGCAAAAACTCTAAAACAAGAAACTTCTCGAGGATCATCTTCGTCTGAAACGCGTCCACCACCTTCTGATTTTCGTCAGCGGCTTTTTCCAGCGATTGCTGAAAGGAGGATGGGTGACTCTAGTTCAGATGATGAGAGTCCATAG 2526 0.4141 MGIQKYMVAVKFSFCVLLIVLLVAAVSFIEKKETHDEFVSELLDSPSGLFDEHTAKVLWSTCWEDSIRLKKEVEDHDLRLPQESSGSTNRISSETQPFVRADIQKLIACHPQFKENFIQCWRKNNLPFHVSGEEDDFKIWHVTYMGSLFSKSSVPRRNLGRVLLQHISEPPSPGPKPLHPPLSPTPFFPKLTPPAIADISSPPSPVINKQEDKHSNRRTVVIAVVITALVTFIAAALFFLYCSGFCKTGRVRKNDERPLLSLSMSDFSVGPSNYSFGNSIKGEKVGFQSSNDNLLDNKKTSVQESQSIGALTAAGSPFELKPPPGRVGTIPSGMPPLKPPPGRLNPLPPEPPSFRPSGPPRPPPPIGPKVARPLANVEAGAEGEAGAPKAKLKPFFWDKVQANSDHSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQRQKESTSQDPSPQYIQIIDKKKSQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEELKLRLFSGELSQLGPADRFLKALVDIPFAFKRMEALLFMSTLNEELTTTMESFAVLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAAKESKSSSSIKTDETEDHYREIGLQVVSHLSSELENVKKAAVLDADSLTATASKLAHGLIKTKNLVNENMKNVEEDRGFCETTKSFVQNAEVDVMKLMEEEKKIMALVKSTGDYFHGNAGKDEGLRLFVVVRDFIIMLDKVCKEVREAQKRAAKTLKQETSRGSSSSETRPPPSDFRQRLFPAIAERRMGDSSSDDESP 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00093 841 SMART it6_source 382 795 IPR015425 -
Sebi7g00093 841 Gene3D Formin, FH2 domain 387 812 IPR042201 -
Sebi7g00093 841 MobiDBLite consensus disorder prediction 795 841 - -
Sebi7g00093 841 MobiDBLite consensus disorder prediction 313 371 - -
Sebi7g00093 841 Pfam Formin Homology 2 Domain 385 780 IPR015425 -
Sebi7g00093 841 SUPERFAMILY Formin homology 2 domain (FH2 domain) 395 798 - -
Sebi7g00093 841 MobiDBLite consensus disorder prediction 800 815 - -
Sebi7g00093 841 MobiDBLite consensus disorder prediction 823 841 - -
Sebi7g00093 841 MobiDBLite consensus disorder prediction 328 370 - -
Sebi7g00093 841 ProSiteProfiles Formin homology-2 (FH2) domain profile. 382 806 IPR015425 -
Sebi7g00093 841 PANTHER FORMIN-RELATED 22 837 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sebi7g00093 841 Coils Coil 780 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00093 Sebi-Chr7 1830263 1835965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00093 362 788 FH2 protein (formin) Gene Family AT3G05470 49.425 3.66e-130 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00093 - - gmx:100793413 775.778