Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00069 ATGGGGAACAATAGCATGTTTCGTTATGCAGATGGAATAGATAAGTTGTTGATGTTATTTGGGACCCTGGGAAGCCTTGGAGATGGACTGCAGAACCCTCTCATGATGTACATTCTTAGTGATGTGATCAACGCCTATGGAGACAAGAATAGCACTATGACAAAGCATGATGTGAACAAGTTTGCATTGAGGCTTTTATATGTTGCAATTGGAGTTGGACTTTCGGCTTTTATTGAAGGAATATGTTGGACAAGAACAGCTGAGAGACAGACTTCCAGAATGAGAATGGAATACCTAAAATCAGTCCTAAGACAAGAAGTTGGTTTCTTTGACACCCAGACTGATGGTTCTTCAACAACCTACAAAGTTGTCTCTCTCATCTCCTCAGATGCAAATACAGTCCAAGTTGCCTTAAGTGAGAAGATACCTGATTGCCTGGCTTACATGTCAACATTCTTATTCTGCCACATCTTTGCATTTGTACTTTCATGGAGACTTGCATTGGCAGCCATACCACTCTCTGTCATGTTCATTGTTCCAGCACTTATATTTGGGAAGATCATGTTGGATGTCACAATGAAAATGATTGAGTCATATGGGGTTGCTGGTGGGATTGCAGAACAAGCAATATCTTCAATAAGAACTGTTTATTCTTATGTTGGGGAGAATCAAACTCTAAACAGATTTAGCAATGCACTTCAAAAAACTATGGAGTTTGGAATAAAGCAAGGTTTTGCAAAGGGGTTGATGTTAGGAAGTATGGGAGTTATTTACATAAGTTGGGGTTTTCAGGCTTGGGTTGGAACTTTTCTTATCACTGAAAAAGGAGAAAAAGGTGGCCATGTATTTGTGGCTGGCTTCAACATCCTCATGGGAGGGCTGAGCATTTTAAGTGCCCTTCCAAATTTAACTGCCATCACAGAGGCAACCGCTGCTGTCACTCGTCTTTTTGAAATGATTGATAGGGTGCCAACTATAGATTCTGAAGAAAAGAAAGGAAAGGCTTTGTCACATGTGAGAGGAGAATTTGAATTTAAAGACATCTACTTTTGTTACCCATCTAGGCCAGATTCACCAATCTTGCAGGGATTCAATCTCACTATTCCAGCAGGCAAGAGGGTAGGCCTTGTGGGGGGAAGTGGTTCAGGAAAATCCACTGTAATTGCATTGCTTGAAAGTAAATCAAGAGCCTGTTCTTTTTGCCACATCCATAAAAGAGAATATTTTGTTTGGAAAGAAGGGGCTTCAATGGAAAATGTGATAAATGCAGCTAAAGCAGCAAATGCACATGATTTCATTGTCAAGTTGCCAGATGGATATGAAACTCAAGTTGGGCAGTTTGGATTTCAATTGTCTGGTGGGCAGAAGCAGCGCATTGCCATAGCAAGAGCTTTACTAAGGGATCCAAAGGTTCTCCTCCTTGATGAAGCAACCAGTGCACTTGATGCTCAATCTGAAAGAGTGGTACAGGCAGCAATTGATCAAGCTTCAAAAGGAAGGACAACAATCATCATTGCTCACCGCTTGTCTACAATAAGAACAGCTAACATTATTGCTGTCCTTCAAGCAGGGAAAGTGATTGAATTAGGTACTCATAATGAGCTCATGGAAATGAATGATGGACAAGGTGGTGAATATGCTCGTATGGTAGAGTTGCAGCAAATAACAACTCAGAATGATGAATCCAAATATTCCAATCTTCAAATAGAAGGAAAGAGCTCCCACAGCCACAGGATGAGCATTCCTCAAAGTCCAGGAGTAAGTTTCAGATCAAGCACAACAGGCACTCCAATGTTGTATCCCTTCAGCCAGGGATTTTCAGTCGGCACACCTTACTCATACTCCATCCAATATGACCCTGATGATGATAGTTATGAAGATAACTTGAAAAGATCAAATTATCCAGCTCCTTCACAGTGGCGTTTACTGAAAATGAATGCACCTGAGTGGGGAAGAGCAGTGCTAGGAATCTTGGGAGCAATAGGCTCAGGAGCAGTACAACCTGTAAATGCATACTGTGTGGGGATACTCATATCAGTTTATTTTTATACTGATCACTCTGAGATGAAGAGAAAAGCTAGAGTCCTGGCCCTCATTTTCTTAGGAATTGGTGTTTTTAACTTCTTCACTAGTATTCTCCAACACTATAATTTTGCAGTTATGGGAGAAAGGTTGACTAAAAGAATAAGAGAGAAAATACTAGAAAAGTTGATGACTTTTGAGATAGGATGGTTTGATAATGAAGAGAACACAAGTGCATCCATTTGTGCAAGATTATCCTCTGAAGCCAACTTGGTTCGTTCCCTTGTTGGTGACAGGATGTCTTTGTTGGCTCAAGCAGTTTTTGGGTCTGTCTTTGCTTACACTCTAGGACTTGTGCTCACATGGAGGCTTTCTCTTGTGATGATTGCAGTGCAGCCATTAGTCATTGGAAGCTTTTATTCAAGAAGTGTCTTGATGAAGGGTATGGCAGAAAAAGCTCGTAAAGCACAAAGGGAAGGAAGCCAACTTGCAAGTGAAGCTGTTATAAACCACAGAACCATAACTGCTTTTAGTTCTCAGAAAAGAATGTTGGCACTCTTCAAATCTACAATGGTAGGCCCTAAAAAAGAGAGTATTAGGCAGTCATGGATTTCAGGCTGTGGTCTTTTCAGCTCCCAATTTTTCAACACTGCATCAACAGCATTGGCTTACTGGTATGGTGGGATGCTCCTGATACATGGACACATAGAACCAAAGCATCTCTTCCAAGCATTTTTAATATTGCTTTTCACTGCATACATCATTGCAGAAGCTGGAAGCATGACTTCTGACTTATCTAAAGGAAGCAGTGCAGTTGGATCAGTTTTTGCTATCCTTGATAGGAAAACTGAGATTGATCCTGAGACATCATGGGCAGGAGACAAAAGAAGGAAAATAAGGGGCAGAGTGGAGCTTAAGAGTGTGTACTTTGCTTATCCAACTAGACCTGACCAAATGATATTCCAGGGTCTGAATCTTAAAGTTGAGGCTGGGAGAACAGTAGCATTAGTGGGGCATAGTGGTTGTGGTAAATCAACTATCATTGGTCTAATAGAAAGGTTTTATGATCCTGTCAAGGGAACTGTATGCATAGATGAACAAGACATCAAGTCATATAATTTGAGAATGCTGAGGTCACATATTGCATTGGTAAGTCAGGAGCCAACACTTTTCAGTGGAACCATTCGAGAAAACATTGCCTATGGGAAAGAAAATGCAACTGAATCTGAGATAAGAAGGGCTGCAACTCTGGCTAATGCTCATGAATTCATAAGTGGAATGAATGATGGGTATGAGACATACTGTGGAGAAAGAGGAGTTCAGTTATCAGGAGGTCAGAAACAGAGAATAGCCTTAGCTCGGGCCATACTGAAGAATCCTGCAATTCTTCTACTAGATGAGGCTACAAGTGCACTTGATAGTGTGTCAGAGATTTTGGTACAAGAAGCACTTGAGAAGATAATGGTTGGAAGAACATGCATAGCAGTGGCACACAGGCTATCTACAATACAGAAATCCAATTCCATTGCAGTGATTAAGAACGGGAAGGTTGTGGAACAAGGTTCACATAACGAATTGATTTCCCTTGGACGTAATGGAGCATACTATTCTCTTGTTAAACTTCAAAGTAGCAGCTCTCCCCCCAGGTGA 3672 0.4104 MGNNSMFRYADGIDKLLMLFGTLGSLGDGLQNPLMMYILSDVINAYGDKNSTMTKHDVNKFALRLLYVAIGVGLSAFIEGICWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQTDGSSTTYKVVSLISSDANTVQVALSEKIPDCLAYMSTFLFCHIFAFVLSWRLALAAIPLSVMFIVPALIFGKIMLDVTMKMIESYGVAGGIAEQAISSIRTVYSYVGENQTLNRFSNALQKTMEFGIKQGFAKGLMLGSMGVIYISWGFQAWVGTFLITEKGEKGGHVFVAGFNILMGGLSILSALPNLTAITEATAAVTRLFEMIDRVPTIDSEEKKGKALSHVRGEFEFKDIYFCYPSRPDSPILQGFNLTIPAGKRVGLVGGSGSGKSTVIALLESKSRACSFCHIHKREYFVWKEGASMENVINAAKAANAHDFIVKLPDGYETQVGQFGFQLSGGQKQRIAIARALLRDPKVLLLDEATSALDAQSERVVQAAIDQASKGRTTIIIAHRLSTIRTANIIAVLQAGKVIELGTHNELMEMNDGQGGEYARMVELQQITTQNDESKYSNLQIEGKSSHSHRMSIPQSPGVSFRSSTTGTPMLYPFSQGFSVGTPYSYSIQYDPDDDSYEDNLKRSNYPAPSQWRLLKMNAPEWGRAVLGILGAIGSGAVQPVNAYCVGILISVYFYTDHSEMKRKARVLALIFLGIGVFNFFTSILQHYNFAVMGERLTKRIREKILEKLMTFEIGWFDNEENTSASICARLSSEANLVRSLVGDRMSLLAQAVFGSVFAYTLGLVLTWRLSLVMIAVQPLVIGSFYSRSVLMKGMAEKARKAQREGSQLASEAVINHRTITAFSSQKRMLALFKSTMVGPKKESIRQSWISGCGLFSSQFFNTASTALAYWYGGMLLIHGHIEPKHLFQAFLILLFTAYIIAEAGSMTSDLSKGSSAVGSVFAILDRKTEIDPETSWAGDKRRKIRGRVELKSVYFAYPTRPDQMIFQGLNLKVEAGRTVALVGHSGCGKSTIIGLIERFYDPVKGTVCIDEQDIKSYNLRMLRSHIALVSQEPTLFSGTIRENIAYGKENATESEIRRAATLANAHEFISGMNDGYETYCGERGVQLSGGQKQRIALARAILKNPAILLLDEATSALDSVSEILVQEALEKIMVGRTCIAVAHRLSTIQKSNSIAVIKNGKVVEQGSHNELISLGRNGAYYSLVKLQSSSSPPR 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00069 1223 ProSitePatterns ABC transporters family signature. 1116 1130 IPR017871 GO:0005524|GO:0016887
Sebi7g00069 1223 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 343 548 IPR003439 GO:0005524
Sebi7g00069 1223 SMART AAA_5 1004 1196 IPR003593 GO:0016887
Sebi7g00069 1223 SMART AAA_5 370 531 IPR003593 GO:0016887
Sebi7g00069 1223 ProSitePatterns ABC transporters family signature. 451 465 IPR017871 GO:0005524|GO:0016887
Sebi7g00069 1223 CDD ABC_6TM_Pgp_ABCB1_D2_like 643 959 - -
Sebi7g00069 1223 Pfam ABC transporter transmembrane region 655 926 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi7g00069 1223 Pfam ABC transporter transmembrane region 18 293 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi7g00069 1223 Gene3D - 356 576 IPR027417 -
Sebi7g00069 1223 Gene3D ABC transporter type 1, transmembrane domain 2 355 IPR036640 GO:0005524|GO:0016020
Sebi7g00069 1223 Gene3D ABC transporter type 1, transmembrane domain 616 964 IPR036640 GO:0005524|GO:0016020
Sebi7g00069 1223 Pfam ABC transporter 361 395 IPR003439 GO:0005524
Sebi7g00069 1223 FunFam ABC multidrug transporter, putative 421 554 - -
Sebi7g00069 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 553 IPR027417 -
Sebi7g00069 1223 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 977 1213 IPR003439 GO:0005524
Sebi7g00069 1223 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 19 308 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi7g00069 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 972 1216 IPR027417 -
Sebi7g00069 1223 FunFam ABC transporter B family member 15-like 6 343 - -
Sebi7g00069 1223 SUPERFAMILY ABC transporter transmembrane region 7 327 IPR036640 GO:0005524|GO:0016020
Sebi7g00069 1223 FunFam Putative ABC transporter B family member 8 617 964 - -
Sebi7g00069 1223 Gene3D - 967 1221 IPR027417 -
Sebi7g00069 1223 SUPERFAMILY ABC transporter transmembrane region 640 960 IPR036640 GO:0005524|GO:0016020
Sebi7g00069 1223 PANTHER ABC TRANSPORTER B FAMILY 704 1215 IPR039421 -
Sebi7g00069 1223 Pfam ABC transporter 996 1144 IPR003439 GO:0005524
Sebi7g00069 1223 CDD ABC_MTABC3_MDL1_MDL2 977 1216 - -
Sebi7g00069 1223 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 654 941 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi7g00069 1223 CDD ABC_6TM_Pgp_ABCB1_D1_like 18 316 - -
Sebi7g00069 1223 FunFam ABC transporter B family member 4 967 1220 - -
Sebi7g00069 1223 Pfam ABC transporter 424 479 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00069 Sebi-Chr7 1461842 1468139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00069 3 556 Calmodulin-binding Proteins AT2G36910 32.888 5.18e-79 283