Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00060 ATGGAATTTAACAAGGACTTTATAGATGGTTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACGTAATGGGGATGGAAACCCGGTGGGAGACCAACCTGGGCTGTCATGGGGCGGGAGGATGATACATGAACTAACACATGATGACATTAGACGTCTGGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGGATTATGCCAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCGAAATGAGAATGGTGATATTGTTAAGCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAGGACAGAGTGAGGGAGGCGAGGCCAATTACTCGTGTGCAATGCACAGCAAGGATGCATGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTACATTCCACGACGATTATAACCATGAGTTAACTCCTCCAACGTGGGTCCAGAAAATGTATGACATGAAAAGGTTATGGGCAAATTCATATATGGGAGACACATTTTATGGTGGTATTAGAACAACGTCTGTGTGTGAGGGGATTAATTCGTTCATTAAGAGGTATGTCCAAAATAGGAACAGCCTGGTGGACTTCCTTCACAACTTCGACAGGGCGTTAAAGGAGTACAGGCACAATGAATTGATTTCTGATTTTAAGTCATTTTACGAAGAACATGTATTTACCACAACTCTTTTTACCATTGAGGAATGTTCCTCCAAAGTGTTCACTAGGAAAAAGTTTTGGGAAGTTAAGTCTGAGATTGAGAGTGCGACTGCGTACAATGTAGTGGATAGGGTTGTGACTGGTGAGGCTGTGAGGTTGACAATGAATAAATTTTGCAAACCGGATTATGAGTATGATGTTGTATTAGATAAAAGTGAATTGAAGTTCAATTTTGAGTGTAGAATGTTTGAGTCATGTGGCATTCTTTGCCGTCACATTTTTTGTGCAATGAAGAATGAGCTCGTGAAAAGCATTCCAAGTAGCCTAATACTGAAGCGATGGACAAAATCAGCGAAGCCTGATTTCATGTCTAGTGAGCCCGTTGTGAGGTTAGATAAGGAAAAGGTTGACATGCTAAGGGAGGGAGGTATAGGTGCTGCATGTGACTATTTATCCCGTGTTGCTAAGAAACATGTGCATGATTACAAGTCCATTATGGATGACATATATAAACTCGATGAAAAAATTGAAAGTCGTAATTGCCAGAGTGAAAAGAAAAATAATGGGCGGGGTCAAATTGGTGATCCAGAGGTGGTGAATACTAAAGGCGCACCAAGGAAGAGTAGAAGGATGACGGAAGGCAGAAGGTGTTCGAACTGTAAACGAAGAGGACACACTAAGAACAAATGTCCTGGATTGAGTCAATGGGATGTTTTAGGGGAAGCTGAAGACGATGAATCTTCGTGGGAGAGTGATGGTGCCATGGGAAATGATAAAGGTGAATTTAGTTGGGGTGATGATTTAACTCTCAGTCAAAGAGGATCGGCCAGTATAAGCAAAGGGAAGAGGCGGTGTGTGTCTCAACCATCCCAAACATCCTTCGGTCGTGCTGAATTGCAGGGACTACATGACAAGGTTGGTGAAAGACAAGCCAAGCAAAGTAGACGTTCAAATGGCAAGCAGAAAAATCAAGGAGTAGACGGAGCAAGAGAGGAGATGAAGTTTGGACCTGGGAAGATGGGTCCAGGAGCGGGCGTTAACAATCTCCCAACTTCCCTTTTTCCTCATTTCCCATCAACGAGCATGTATCCCCCTCCCCCATGTCCGCGACCTCCACCCTATGCTCTGTTTTATGGATACGGGTCATACGGTTATTATGGGTACCCTCAATAG 1881 0.4317 MEFNKDFIDGCSTFWTDENSESNRDESRNGDGNPVGDQPGLSWGGRMIHELTHDDIRRLEFGSEGEAYSFYSDYAKQRGFAVRKDDIERNENGDIVKRYLVCNKEGTRDKKHLERKDRVREARPITRVQCTARMHVYLDMRSGKWKVSTFHDDYNHELTPPTWVQKMYDMKRLWANSYMGDTFYGGIRTTSVCEGINSFIKRYVQNRNSLVDFLHNFDRALKEYRHNELISDFKSFYEEHVFTTTLFTIEECSSKVFTRKKFWEVKSEIESATAYNVVDRVVTGEAVRLTMNKFCKPDYEYDVVLDKSELKFNFECRMFESCGILCRHIFCAMKNELVKSIPSSLILKRWTKSAKPDFMSSEPVVRLDKEKVDMLREGGIGAACDYLSRVAKKHVHDYKSIMDDIYKLDEKIESRNCQSEKKNNGRGQIGDPEVVNTKGAPRKSRRMTEGRRCSNCKRRGHTKNKCPGLSQWDVLGEAEDDESSWESDGAMGNDKGEFSWGDDLTLSQRGSASISKGKRRCVSQPSQTSFGRAELQGLHDKVGERQAKQSRRSNGKQKNQGVDGAREEMKFGPGKMGPGAGVNNLPTSLFPHFPSTSMYPPPPCPRPPPYALFYGYGSYGYYGYPQ 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00060 626 SUPERFAMILY Retrovirus zinc finger-like domains 439 470 IPR036875 GO:0003676|GO:0008270
Sebi7g00060 626 MobiDBLite consensus disorder prediction 438 455 - -
Sebi7g00060 626 ProSiteProfiles Zinc finger CCHC-type profile. 451 467 IPR001878 GO:0003676|GO:0008270
Sebi7g00060 626 MobiDBLite consensus disorder prediction 14 43 - -
Sebi7g00060 626 MobiDBLite consensus disorder prediction 537 551 - -
Sebi7g00060 626 PANTHER OS01G0519700 PROTEIN 59 160 - -
Sebi7g00060 626 MobiDBLite consensus disorder prediction 417 583 - -
Sebi7g00060 626 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Sebi7g00060 626 MobiDBLite consensus disorder prediction 504 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00060 Sebi-Chr7 1305062 1309847 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi7g00060 FAR1 1.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00060 - - aip:107640898 325.094