Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00037 ATGCAAGTTTTAGTGAAGAGTAGTGTGAAGGTGGGAAGAAGGCCTAAGAAAGGATCTTCTGTGTCTTTGATCAAAGGACAATGGACTGAAGAAGAAGACAGGAAACTGTTAAAGTTGGTGAAGCAACATGGTGTAAGGAAATGGTCTCAAATAGTTGACAAGTTGGATGGAAGAGCTGGCAAGCAGTGTCGAGAGAGACGGAACAATCATCTGCGGCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGATGATATTAGTAGAAATGCATGCCAAGATGGGAAATCGTTGGGCAGAGATTGCAAAGCGGATTCCAGGAAGAACAGAGAATGCTAAAAAGAACCATTGGAATGCCACAAAGAGGAGGCTTAATTCAAAGAGAAAGAACAAAAAGACAGCAAACTCCAATGGAAAGCCACAATCCTCTATCCTTCAAAACTATATCAGAAGCAAGACTCAAACCAACTCCACAACAACAATCTCTGACTCTGACCCTGCTGCAACAGAACAATCCCACCTTCAACTCTCTGATTCTGTTACCAATGACAATTTCTCATCACCACTAATAGTTGATCACCCATATGATGGTGATGATGAGTTACTCTTCATGCAACAACTTTTCAAGGACAATCGGACCCAACAGCAACCACTTGTCACTAATCAGAATGGGTTTATTCATTCCAATGCTAAGCCAAACTCATATAACAATGTGTACTTGGATGAGAGTCTTATTCTTAGAAAGACTCCTCCCACCCCCACCATCAATTCTGATCATGTCTATCTTTCTCACTTGCTTAATGGAACTGTCACTTCATCACTTTGCTATAATTATGGGATTCAGTACCAGAACATGGACTTGCAATTGGGGGATCAAAATTCTTCAGATGGAAAGAAAGAGATGGATTTGATAGAGTTGGTTTGTTCTGCTCAGTTTTTCCACTAG 948 0.4061 MQVLVKSSVKVGRRPKKGSSVSLIKGQWTEEEDRKLLKLVKQHGVRKWSQIVDKLDGRAGKQCRERRNNHLRPDIKKDSWSEEEEMILVEMHAKMGNRWAEIAKRIPGRTENAKKNHWNATKRRLNSKRKNKKTANSNGKPQSSILQNYIRSKTQTNSTTTISDSDPAATEQSHLQLSDSVTNDNFSSPLIVDHPYDGDDELLFMQQLFKDNRTQQQPLVTNQNGFIHSNAKPNSYNNVYLDESLILRKTPPTPTINSDHVYLSHLLNGTVTSSLCYNYGIQYQNMDLQLGDQNSSDGKKEMDLIELVCSAQFFH 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00037 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 126 IPR017930 -
Sebi7g00037 315 Gene3D - 78 155 - -
Sebi7g00037 315 ProSiteProfiles Myb-like domain profile. 20 71 IPR001005 -
Sebi7g00037 315 CDD SANT 28 71 IPR001005 -
Sebi7g00037 315 PANTHER MYB PROTEIN-RELATED 25 150 - -
Sebi7g00037 315 FunFam Transcriptional activator Myb isoform A 24 77 - -
Sebi7g00037 315 MobiDBLite consensus disorder prediction 136 176 - -
Sebi7g00037 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 75 IPR017930 -
Sebi7g00037 315 CDD SANT 79 122 IPR001005 -
Sebi7g00037 315 MobiDBLite consensus disorder prediction 106 176 - -
Sebi7g00037 315 Gene3D - 24 76 - -
Sebi7g00037 315 Pfam Myb-like DNA-binding domain 28 86 - -
Sebi7g00037 315 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Sebi7g00037 315 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Sebi7g00037 315 SMART sant 24 73 IPR001005 -
Sebi7g00037 315 SMART sant 76 124 IPR001005 -
Sebi7g00037 315 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00037 Sebi-Chr7 714143 715580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00037 16 311 MYB Transcription Factor Family AT5G58850 43.333 5.05e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi7g00037 Myb_DNA-bind_6 3.1e-17 CL0123