Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00034 ATGCAAGTTTTAGGGAAGAGTAGTGTGAAGGTGGGAAGAAGGCCTAAGCAAGGATCTTCTGTGTCTTTGATCAAAGGACAATGGACTGAAGAAGAAGACAGGAAACTGTTAAAGTTGGTGAAGCAACATGGTTTAAGGAAATGGTCTCAAATAGCTGACAAGTTGGATGGAAGAGTTGGCAAGCAGTGTCGAGAGAGGTGGAACAATCATCTGCGACCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGATGATATTAGTAGAAATGCATGCCAAGATGGGAAATCGTTGGGCAGAGATTGCAAAGCGGATTCCAGGAAGAACAGAGAATGCTAAAAAGAACCATTGGAATGCCACAAAGAGGAGGCTTAATTCAAAGAGAAAGAACAAAAAGACAGCAAACTCCAATGGAAAGCCACAATCCTCTATCCTTCAAAACTATATCAAAAGAAAGACTCAAACCAGCTCCACAACAACAATCTCTGACTCTGACCCTGCTGCAACAGAACAATCCCACCTTCAACTCTCTGATTCTGTTACCAATGACAATTTCTCATCACCACTAATAGTTGATCACCCATATGATGGTGATGATGAGTTACTCTTCATGCAACAACTTTTCAAGGACAATCGGACCCAACAGCAACCACTTGTCACTGATCAGAATGGGTTTATTCATTCCAATGCTGAGCCAAACTCATATAACAATGTGTACTTGGATGAAAGTCTTATTCTTAGAAAGACTCCTCCCACCCCCACCATCAATTCTGATCATGTCTATCTTTCTCACTTGATGAATGGAACTGCCACTTCATCACTTTGCTATAATTATGGGATTCAGTACCAGAACATGGACTTGCAATTGGGGGATCAAAATTCTTCAGATGGAAAGAAAGAGATGGATTTGATAGAGTTGGTTTGTTCTGCTCAATTTTTCCACTAG 948 0.4061 MQVLGKSSVKVGRRPKQGSSVSLIKGQWTEEEDRKLLKLVKQHGLRKWSQIADKLDGRVGKQCRERWNNHLRPDIKKDSWSEEEEMILVEMHAKMGNRWAEIAKRIPGRTENAKKNHWNATKRRLNSKRKNKKTANSNGKPQSSILQNYIKRKTQTSSTTTISDSDPAATEQSHLQLSDSVTNDNFSSPLIVDHPYDGDDELLFMQQLFKDNRTQQQPLVTDQNGFIHSNAEPNSYNNVYLDESLILRKTPPTPTINSDHVYLSHLMNGTATSSLCYNYGIQYQNMDLQLGDQNSSDGKKEMDLIELVCSAQFFH 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00034 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 126 IPR017930 -
Sebi7g00034 315 Gene3D - 78 168 - -
Sebi7g00034 315 PANTHER MYB PROTEIN-RELATED 25 150 - -
Sebi7g00034 315 MobiDBLite consensus disorder prediction 106 182 - -
Sebi7g00034 315 CDD SANT 28 71 IPR001005 -
Sebi7g00034 315 ProSiteProfiles Myb-like domain profile. 20 71 IPR001005 -
Sebi7g00034 315 SMART sant 76 124 IPR001005 -
Sebi7g00034 315 SMART sant 24 73 IPR001005 -
Sebi7g00034 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 75 IPR017930 -
Sebi7g00034 315 Pfam Myb-like DNA-binding domain 28 86 - -
Sebi7g00034 315 FunFam Transcriptional activator Myb isoform A 24 77 - -
Sebi7g00034 315 Gene3D - 24 76 - -
Sebi7g00034 315 MobiDBLite consensus disorder prediction 136 182 - -
Sebi7g00034 315 CDD SANT 79 122 IPR001005 -
Sebi7g00034 315 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Sebi7g00034 315 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Sebi7g00034 315 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00034 Sebi-Chr7 688346 689787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00034 16 311 MYB Transcription Factor Family AT5G58850 42.424 1.18e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi7g00034 Myb_DNA-bind_6 1.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00034 K09422 - gmx:100786295 330.102