Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00029 ATGAAAGCCACTAGTGATGGTGATGATGCCACTCCAATTCATGGGAGTGGAAATACAAAGGTCATGACCAACCATTCTATGTGTCGTTCAGGCCCTCCTTTGACAGCCATAGACAGGTTCTTATGGGGCCAACAAATCCATGCAAATGCAAGTATTTTTGACAATCAGATCTCAGCTTTTGCTTGTTCTGGTGCTTCAACTACATGTAGCTTTCTGTGGCCTAATAACACTCAAGAAGCAAGGAAGAGTAGTGTGAAGGTGGGAAGAAGGCCTAAGAAAGGATCTTCTGTGTCTTTGATCAAAGGACAATGGACTGAAGAAGAAGACAGGTCTCAAATAGCTGACAAGTTGGATGGAAGAGCTGGCAAGCAGTGTCGAGAGAGATGGAACAATCATCTGCGGCCTGATATTAAGATAGTTGGAGTGAAGAAGAAGATGATATTAGTAGAAATGCATGCCAAGATGGGAAATCGTTGGGCAGAGATTGCAAAGCGGATTCCAGGAAGGACAGAGAATGCTATAAAGAACCACTGGAATGCCACAAAGAGGAGGCTTAATTCAAAGAGAAAGAACAAAAAGACAGCAAGCTCCAATGGAAAGCCACAATCTTCTATCCTTCAAAACTATATTAGAAGCAAGACTCAAACTAGCTCCACAACAACAATCTCTGACTCTAACCCTGCTGCAACAGAACAATCCCACCTTCAGCTCTCTGATTCTGTTACCAATGACAATTTCTCATCACCAATAATAGCTGATCACCCATATGATGGCGATGATGAGTTACTCTTCATGCAACAACTTTTCAAGGACAATCTGACCCAACAGCAACCACTTGTCACTGATCAGAATGGGTTTATTCATTCCAATGCTAAGCCAAACTCATATAACAATGTGTACTTGGATGAGAGTCTTATTCTTAGAAAGACTCCTCCCACCCCCACCATCAATTCTGATCATGTCTATCTTTCTCACTTGCTGAATGGAACTGCCACTTCATCACTTTGCTATAATTATGGGATTCAGTACCAGAACATGGACTTGCAATTGGGGGATCAAAATTCTTCAGATGGAAAGAAAGAGATGGATTTGATAGAGTTGGTTTGTTCTGCTCAGTTTTCCACTAGTAGTGATGACTCTGAATTTGGATGTTTTTATTTTAGTACTTTGGAATAA 1176 0.4124 MKATSDGDDATPIHGSGNTKVMTNHSMCRSGPPLTAIDRFLWGQQIHANASIFDNQISAFACSGASTTCSFLWPNNTQEARKSSVKVGRRPKKGSSVSLIKGQWTEEEDRSQIADKLDGRAGKQCRERWNNHLRPDIKIVGVKKKMILVEMHAKMGNRWAEIAKRIPGRTENAIKNHWNATKRRLNSKRKNKKTASSNGKPQSSILQNYIRSKTQTSSTTTISDSNPAATEQSHLQLSDSVTNDNFSSPIIADHPYDGDDELLFMQQLFKDNLTQQQPLVTDQNGFIHSNAKPNSYNNVYLDESLILRKTPPTPTINSDHVYLSHLLNGTATSSLCYNYGIQYQNMDLQLGDQNSSDGKKEMDLIELVCSAQFSTSSDDSEFGCFYFSTLE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00029 391 Gene3D - 110 138 - -
Sebi7g00029 391 PANTHER MYB PROTEIN-RELATED 101 210 - -
Sebi7g00029 391 MobiDBLite consensus disorder prediction 172 236 - -
Sebi7g00029 391 Pfam Myb-like DNA-binding domain 108 138 - -
Sebi7g00029 391 CDD SANT 104 133 IPR001005 -
Sebi7g00029 391 MobiDBLite consensus disorder prediction 181 195 - -
Sebi7g00029 391 Gene3D - 142 209 - -
Sebi7g00029 391 MobiDBLite consensus disorder prediction 196 236 - -
Sebi7g00029 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 147 186 IPR017930 -
Sebi7g00029 391 SMART sant 100 135 IPR001005 -
Sebi7g00029 391 SMART sant 136 184 IPR001005 -
Sebi7g00029 391 Pfam Myb-like DNA-binding domain 147 179 IPR001005 -
Sebi7g00029 391 ProSiteProfiles Myb-like domain profile. 143 182 IPR001005 -
Sebi7g00029 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 137 IPR017930 -
Sebi7g00029 391 SUPERFAMILY Homeodomain-like 101 183 IPR009057 -
Sebi7g00029 391 CDD SANT 147 182 IPR001005 -
Sebi7g00029 391 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00029 Sebi-Chr7 619375 621174 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00029 30 371 MYB Transcription Factor Family AT5G58850 35.577 2.82e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi7g00029 Myb_DNA-binding 8.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00029 K09422 - gmx:100786295 318.546