Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00027 ATGCAGGAAATGTCCGCTACTGTCATTGACAGGAATGATTCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAGAATGGTGAACCTAAAAGGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAGTTGTTTTCCAGGCAAAGTGCTTAGAGACGGGGGAAGCTGTAGCTATAAAAAAGGTCTTGCAAGACAAGCGGTACAAAAATCGAGAGCTGCAGTTGATGCGCTTGATGGATCACCCAAATGTAATTTCCCTGAAACATTGTTTCTTCTCTACAACAAGCAAAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTTCCTGAGACACTGTATCGAGTTCTAAAGCACTACAATACTATGAACCAGAAGATGCCTCTCATCTATGTGAAACTATATACATATCAAATCTTTAGGGGATTAGCATACATCCATACCGTACCAGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTCGGGAGTGCCAAAGTTCTGGTCAAGGGTGAATCAAACATCTCGTACATCTGTTCACGTTATTATCGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCATTATTTCCAGGAGAAAATCAAGTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCGAATTATACAGACTTTAGATTCCCTCAGATAAAAGCTCATCCTTGGCACAAGGTTTTCCACAAGAGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTTCGCTGCACTGCGCTGGAGGCATGTGCCCATCCTTTCTTTGATGAGCTTCGTGAACCAAATGCCCGACTACCAAATGGCCGTCCACTGCCCCCACTTTTTAACTTTAAACAGGAATTAGCTGGAGCATCACCTGAACTGATCAATAGGCTCATACCAGAGCACATTAGGCGGCAGACTGGTCTTGGTTTCCCTCAACCGGCTGCTACATAG 1134 0.4347 MQEMSATVIDRNDSVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETLYRVLKHYNTMNQKMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELAGASPELINRLIPEHIRRQTGLGFPQPAAT 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00027 377 CDD STKc_GSK3 32 324 IPR039192 -
Sebi7g00027 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Sebi7g00027 377 FunFam Shaggy-related protein kinase kappa 117 364 - -
Sebi7g00027 377 Gene3D Transferase(Phosphotransferase) domain 1 117 364 - -
Sebi7g00027 377 ProSiteProfiles Protein kinase domain profile. 37 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi7g00027 377 Gene3D Phosphorylase Kinase; domain 1 22 116 - -
Sebi7g00027 377 SMART serkin_6 37 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi7g00027 377 FunFam Glycogen synthase kinase-3 beta 21 116 - -
Sebi7g00027 377 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524
Sebi7g00027 377 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 3 366 - -
Sebi7g00027 377 SUPERFAMILY Protein kinase-like (PK-like) 36 345 IPR011009 -
Sebi7g00027 377 Pfam Protein kinase domain 37 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00027 Sebi-Chr7 570443 573927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00027 41 359 MAP Kinase Gene Family AT3G59790 35.329 3.52e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sebi7g00027 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00027 K14502 - qsu:111995841 738.028