Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00018 ATGGGGATCGAAAAGTGTGGCGATCAAACTGGACATGAAAAGGCATGCGATAGATTGGAGTGGAACTTTTTGGAGAAATGTCCACTAGCCTTTGGTTTCAATGAAGAATGGGATTGGGAACCTGTCGTCCTCCGCAAGAAAGCACCTACCGCCGCCGCCAAGAAGGACGAGAAAGCCGTCAACGCCGCCCGCCGTTCCGGTGCAGACATCGAAACCGTTAAGAAATATAATGCTGGGACAAACAAAGCTGCCTCGAGCAGCACTTCATTCAACACTAAGAGGCTGGATGACGATACAGAGAATCTAGCTCATGAGCGTGTACCAACTGAACTCAAGAAAGCTATAATGCAAGCTAGGACGGATAAGAAACTTACTCAGGCTCAGCTTGCTCAGTTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTATGAATCAGGGAAGGCCATTCCAAACCAGCAGATACTTGGCAAGTTAGAGAGAGCCCTTGGAGCTAAACTGCGTGGCAAGAAATAA 513 0.4815 MGIEKCGDQTGHEKACDRLEWNFLEKCPLAFGFNEEWDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKYNAGTNKAASSSTSFNTKRLDDDTENLAHERVPTELKKAIMQARTDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQILGKLERALGAKLRGKK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00018 170 MobiDBLite consensus disorder prediction 81 102 - -
Sebi7g00018 170 Coils Coil 115 135 - -
Sebi7g00018 170 Gene3D - 99 170 IPR010982 GO:0003677
Sebi7g00018 170 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 37 170 - -
Sebi7g00018 170 CDD HTH_XRE 113 163 IPR001387 -
Sebi7g00018 170 Pfam Multiprotein bridging factor 1 38 107 IPR013729 -
Sebi7g00018 170 SMART mbf_short4 114 169 IPR001387 -
Sebi7g00018 170 ProSiteProfiles Cro/C1-type HTH domain profile. 115 169 IPR001387 -
Sebi7g00018 170 SUPERFAMILY lambda repressor-like DNA-binding domains 109 166 IPR010982 GO:0003677
Sebi7g00018 170 Pfam Helix-turn-helix 115 165 IPR001387 -
Sebi7g00018 170 FunFam Multiprotein bridging factor 1 99 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00018 Sebi-Chr7 424266 438114 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Sebi7g00018 MBF1 1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00018 K03627 - gmx:100500420 249.98