Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00012 ATGGCATCAGAAAGAAATTACAACATATCTGAAGAAAACAAGATCAGGGAAGGGTCTTCTCAAAGTTCAAAAAAGCGTTCCTTGTTGGACTTAAATGAAGAAGCTGAAGATGATGAAGTAAAGGGTGATGAGAATGAGAGGCAGTATGTGAGGTCCAAAATGCCAAGGCTCCGTTGGACTCATGATCTCCATCTAGCTTTTGTGCGTGCTGTTCACAAGCTTGGTGGTCAGGAAAGAGCAACACCCAAGTTAGTACTCCAGTTAATGAATGTGAGGGGACTTAGTATTGCACATGTAAAGAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGGATCTGGCCAAGTTTTGTCCAAACATAGGGCAATGCAAGGAAAACAACAAATTTATGAGATGTACCAAAAACTTAATGTCCAAGGGCACTTTGGGGTTGATAACAAAAATTATCTACCATCATCACCTTTGCTAATAAAACAACCATATGGATTCAAAGCTCATGGATCTTCAAGATTTCAGCAGGTTGGACTTTTTGATAGTCACACGACTAGATCAAGATCATCATGTGAGGCCCCTAACTATAGAACCTTCCTTCAAAGGAACGAAAGGATGGCGAGCTCACACCTATTTCATGCAACAACAAGAAATGAACCTGTTGCAATACCATCTCCTTGGAGCGTCAATGCTAGTTCTTGGGGTACAATCTTCCATGGCCATGCGAAGCTTGGTGCTGAGGTCCAAGATCTAAAAGCTGAAATGCAATTCACAAATGAGGTTCAGGTCAAAGAACACTCCGAAAGATTGGAGGAGAACAAAGGGTCAGCAAATTTGCTAGAGCTAAGGTTATTAAGTCACGATTTAGGAAACCTTGGAGAGACAAATAATGGTGGTCTAGAAAGTGAACAAGAAACCAATACAATGCTATCTCTTTCGTTGTTCCCTTCCTCATCATCAATGGAACAAGCTCAATGTTATGAAAAACACATTAATACATAG 996 0.4036 MASERNYNISEENKIREGSSQSSKKRSLLDLNEEAEDDEVKGDENERQYVRSKMPRLRWTHDLHLAFVRAVHKLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDGSGQVLSKHRAMQGKQQIYEMYQKLNVQGHFGVDNKNYLPSSPLLIKQPYGFKAHGSSRFQQVGLFDSHTTRSRSSCEAPNYRTFLQRNERMASSHLFHATTRNEPVAIPSPWSVNASSWGTIFHGHAKLGAEVQDLKAEMQFTNEVQVKEHSERLEENKGSANLLELRLLSHDLGNLGETNNGGLESEQETNTMLSLSLFPSSSSMEQAQCYEKHINT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00012 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 111 IPR017930 -
Sebi7g00012 331 FunFam Myb family transcription factor 53 111 - -
Sebi7g00012 331 Gene3D - 54 111 - -
Sebi7g00012 331 MobiDBLite consensus disorder prediction 1 47 - -
Sebi7g00012 331 Pfam Myb-like DNA-binding domain 57 107 IPR001005 -
Sebi7g00012 331 SUPERFAMILY Homeodomain-like 53 109 IPR009057 -
Sebi7g00012 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 27 170 IPR046955 GO:0003700
Sebi7g00012 331 NCBIfam myb-like DNA-binding domain, SHAQKYF class 55 110 IPR006447 GO:0003677
Sebi7g00012 331 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00012 Sebi-Chr7 348098 351376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00012 18 123 G2-like Transcription Factor Family AT2G42660 54.098 5.00e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi7g00012 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00012 - - lang:109337615 273.863