Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi7g00008 ATGGGATCTTTGTTTTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGAAGAAGACTAAGGATGTTACGTGACGTGTGCAGGGGCTTGATGCATGTGCATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCGAATTGTCTTGTGGATAAGCACTGGACAGTGAAAATCTGTGATTTTGGACTTTCGAGAATAGTAACAGATACTCCCATGAGAGATTCTTCATCAGCTGGAACCCCAGAATGGATGGCTCCTGAACTGATTCGAAACGAACCACTCTCTGAAAAATGTGATATCTTTAGCCTGGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCATGGGAAGGGGTACCGCCAGAGAGGGTGGTTTATACCGTTGCTAATGAGGGTGCCAGATTGGAGATTCCAGAAGGCCCGCTGGGCAGGCTGATTTCAGAGTGCTGGGCAGAACCGCATGAGAGGCCATCTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATAGAGTACTCAATGTGCTGA 537 0.4767 MGSLFYLIHVSGQKKKLSWRRRLRMLRDVCRGLMHVHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIVTDTPMRDSSSAGTPEWMAPELIRNEPLSEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGARLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSMC 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi7g00008 178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Sebi7g00008 178 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi7g00008 178 Gene3D Transferase(Phosphotransferase) domain 1 1 177 - -
Sebi7g00008 178 Pfam Protein tyrosine and serine/threonine kinase 13 170 IPR001245 GO:0004672|GO:0006468
Sebi7g00008 178 SUPERFAMILY Protein kinase-like (PK-like) 2 170 IPR011009 -
Sebi7g00008 178 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 170 - -
Sebi7g00008 178 SMART serkin_6 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi7g00008 Sebi-Chr7 262291 263804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi7g00008 1 178 MAP Kinase Kinase Kinase AT3G58640 79.775 1.00e-105 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Sebi7g00008 PK_Tyr_Ser-Thr 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi7g00008 - - gmx:100807193 354.755