Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi799g00016 ATGGGCATTGCACTTGTCATAATCCTTTCATTACTCTGGATTTGTTTGCTATCAAAAAAGGAAAGAGCTGCTAGGAGATACAAGGAAATAAAGAAACAAGTCAACCAAGAATCAAATAGAAAAGATGGCACAAAACTTATTACCTTCCATGGTGATCTTCCATACTCATCCTCTGAGATCATAGAAAAGCTGGAGTCTCTTGATGAAGACGATGTAGTAGGTTCTGGAGGATTTGGTACTGTTTACCGAATGGTGATGAATGACTGTGGTACATTTGCTGTTAAGCGGATTGATAGAAGTCGTGAAGGTTCTGATAAGGGGTTTGAAAGGGAACTAGAGATCTTGGGTAACATCAAGCATATAAATCTAGTAAACCTGCGTGGTTACTGCAGGCTCCCTTCTACAAAGCTTCTAATCTATGATTATTTGGCCATGGGCAGCTTAGATGATCTCTTGCATGATGCCCATGTTACAACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTATCTACAAAGTGGGAGAGCCACTGAGAAATCAGATGTGTATAGCTTTGGAGTTCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTTCCTTTGCAAAGAGAGGTTTAAATGTTGTTGGTTGGATGAACACGTTACTGAAAGAAAACAGATTGGAAGATGTGGTAGACAAAAGATGCAGTGATGCAGAATGGGAATCTGTTGAAGTAATTCTTGAGCTAGCAGCAAGTTGTACAGATGCAAATGCAGATGATCGTCCTACAATGAATCAGGTATTACAGTTGCTGGAACAAGAGGTCATGTCTCCTTGCCCAAGTGATTTTATGAGTCACATTCAGATCACTGTTAGATGA 873 0.4044 MGIALVIILSLLWICLLSKKERAARRYKEIKKQVNQESNRKDGTKLITFHGDLPYSSSEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDKGFERELEILGNIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFAKRGLNVVGWMNTLLKENRLEDVVDKRCSDAEWESVEVILELAASCTDANADDRPTMNQVLQLLEQEVMSPCPSDFMSHIQITVR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi799g00016 290 Coils Coil 17 40 - -
Sebi799g00016 290 SUPERFAMILY Protein kinase-like (PK-like) 46 276 IPR011009 -
Sebi799g00016 290 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
Sebi799g00016 290 Pfam Protein kinase domain 158 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi799g00016 290 Pfam Protein kinase domain 69 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi799g00016 290 Gene3D Transferase(Phosphotransferase) domain 1 139 283 - -
Sebi799g00016 290 Gene3D Phosphorylase Kinase; domain 1 25 138 - -
Sebi799g00016 290 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 154 270 - -
Sebi799g00016 290 ProSiteProfiles Protein kinase domain profile. 67 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi799g00016 Sebi-Chr799 198203 201280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi799g00016 1 278 Receptor kinase-like Gene Family AT2G35620 37.931 4.31e-68 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Sebi799g00016 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi799g00016 - - thj:104821455 410.994