Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi799g00011 ATGGGAAACTGCAACGCTTGCACGAGAGCTGACGTGGTGGAGGACAACACCAAGTCCAACGACCCGAACCACGGTCGAAAGAAGGAAACGAACCAAAAAAAACCGAACTCACACGCGAATGAACCGGTTCGGTCGGCGGCCCCGATCCGGGTGCTGAGAGACGTGATTCCAATGAGCCACCGGACTCGAATCAGCGACAAGTACATATTGGGCCGAGAATTGGGCCGGGGCGAGTTCGGGATCACGTACCTGTGCACGGACCGCGAGACGAAGGAGGCACTGGCCTGCAAGTCAATCACGAAGCGGAAGCTTCGAACCGCGGTGGACATCGAAGACGTGAGGCGCGAGGTGGCTATTATGTCCACGCTGCCGGAACACCCTAACATCGTGAAGCTTAAGGCGACCTATGAGGATAACGAGAACGTGCACCTCGTCATGGAGCTCTGTGAGGGTGGCGAGCTCTTCGACCGGATTGTTGCCAGGGGTCACTACAGTGAACGCGCCGCCGCCAACATAGCTCGAACCATCGCTGAGGTAGTTAGGATGTGCCATGCCAACGGAGTCATGCATAGGGACCTCAAACCAGAGAATTTTCTCTTCGCTAACAAGAAAGAGAATTCGCCTCTTAAGGCTATTGATTTTGGCCTCTCTGTGTTTTTCAAACCTGGAGAGAGGTTTTCAGAGATTGTTGGGAGTCCTTACTACATGGCTCCGGAGGTATTGAAGAGGAATTATGGGCCAGAAGTTGATGTATGGAGCGCTGGGGTTATTCTTTATATTCTGTTATGTGGTGTTCCTCCGTTTTGGGCAGAGAGTGAGCAAGGGGTGGCTTTGGCAATTTTAAGGAGCGTGATTGACTTTAAGAGGGAACCTTGGCCTCAGATATCAGAAAGTGCTAAGAGCCTTGTGCGAGGGATGTTGGAGCCGGATCCTAAAAAGCGCTTGACGGCTGAACAGGTGCTTGAACATCCTTGGCTGCAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTAAGGTCAAGGCTTAAGCAGTTCTCTGTGATGAATAGATTCAAAAAGAAAGCTCTGCGGGTAATTGCAGAACATTTATCTGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGATACTGACAAAGATGGCAGAGTAACATACGAGGAACTGAAGGCTGGGATGAGGAAGGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGATGCTATTTGAAGTGGAAGCATTAACAGATGAGTCAGGAGTAGCTGATGCTGATGTATTGAATGACATCATGTGTGAAGTTGACACTGACAAGGATGGTCGCATCAGTTATGAGGAGTTTGTGGCCATGATGAAAACTGGAACAGACTGGAGAAAAGCATCTAGGCAATATTCAAGGGAGAGATTCAAGAGTTTGAGCCTAAATTTGATGAAGGACGGCTCACTTCAGCTTCATGATGGAATTAGTGGTCAAGCTGTTGTGGTTTGA 1500 0.4853 MGNCNACTRADVVEDNTKSNDPNHGRKKETNQKKPNSHANEPVRSAAPIRVLRDVIPMSHRTRISDKYILGRELGRGEFGITYLCTDRETKEALACKSITKRKLRTAVDIEDVRREVAIMSTLPEHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAANIARTIAEVVRMCHANGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAESEQGVALAILRSVIDFKREPWPQISESAKSLVRGMLEPDPKKRLTAEQVLEHPWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKKALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVTYEELKAGMRKVGSQLAEPEIKMLFEVEALTDESGVADADVLNDIMCEVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGISGQAVVV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi799g00011 499 Pfam Protein kinase domain 70 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi799g00011 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Sebi799g00011 499 Gene3D Phosphorylase Kinase; domain 1 69 153 - -
Sebi799g00011 499 SMART efh_1 373 401 IPR002048 GO:0005509
Sebi799g00011 499 SMART efh_1 430 458 IPR002048 GO:0005509
Sebi799g00011 499 Gene3D - 422 497 - -
Sebi799g00011 499 Gene3D - 367 415 - -
Sebi799g00011 499 MobiDBLite consensus disorder prediction 14 46 - -
Sebi799g00011 499 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Sebi799g00011 499 SMART serkin_6 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi799g00011 499 CDD EFh 374 456 IPR002048 GO:0005509
Sebi799g00011 499 SUPERFAMILY EF-hand 354 482 IPR011992 -
Sebi799g00011 499 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Sebi799g00011 499 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Sebi799g00011 499 PANTHER SERINE/THREONINE-PROTEIN KINASE 61 439 - -
Sebi799g00011 499 Gene3D Transferase(Phosphotransferase) domain 1 154 336 - -
Sebi799g00011 499 FunFam calcium-dependent protein kinase 13 154 334 - -
Sebi799g00011 499 FunFam Calcium-dependent protein kinase 1 70 153 - -
Sebi799g00011 499 ProSiteProfiles Protein kinase domain profile. 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi799g00011 499 Pfam EF-hand domain pair 374 456 IPR002048 GO:0005509
Sebi799g00011 499 CDD STKc_CAMK 67 325 - -
Sebi799g00011 499 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Sebi799g00011 499 MobiDBLite consensus disorder prediction 14 35 - -
Sebi799g00011 499 SUPERFAMILY Protein kinase-like (PK-like) 50 351 IPR011009 -
Sebi799g00011 499 Gene3D - 344 366 - -
Sebi799g00011 499 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi799g00011 Sebi-Chr799 116738 120920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi799g00011 1 499 EF-hand Containing Proteins AT1G18890 74.000 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi799g00011 Pkinase 1.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi799g00011 K13412 - gmx:100809838 885.174