Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi799g00005 ATGGGGCAAAAAAAGCGAAACAGTGCTCCGCGCTCCAAATCATCGCTGGCGTCGGCACAGGCGACCGCCGTCGCCACCACAGTTTCGGCGGAAGGGGAGTCAAACACGGTTGCAGATCAAAGTCCCGATAAGAACGAGTTCACGACTCCTCAATCTGCTTTTCCGTCTCACTCAGCAATCAAGGCGGAATGCGAGCGAGCCCTAACGGCGCTCCGGCGCGGCAACCACACGAGGGCGCTGAAACTAATGAAGGATTGCTGCTCCCGCCATGAGAACTCGCCTCACTCGGCGTTCGTCCACCGAGTCCACGGCACTGTGTGGGTGAAGGTTGCGGCGGTTATGGACGACCCGAGCGCGAAGCAGAGGCACTTGAAAAACGCTGTCGAGTGCGGCAGAAAAGCCGTTGAACTCTCCCCAAACTCGATCGAGTTTGCGCACTTTTATGCGAGCGCGCTGTTCGACACGGCGAACGAAGGTAAAGAGTTCGAGGAAGTGGTGCACGAGTGCGAGAGGGCACTCGCGGTTGAAAAACCCAACGACCCTGCGAAGGAGAGCTTACAGGACGAGAGCCAGCAGAAGATACCGACGGCGGAGGCACGTGTGTTGCACGTGCAGAACGAACTCCGACAACTGATTCAGAAGGCCAACATTGCTTCCTTGTCCAGCTGGATGAAGCACTTGGGCAATGGGGAGGAGAAGTTTCGGTTGATTCCTATACGGAGGCCCACCGAGGACCCAATGGAAGTGAGGGTAGTTCAGTCCAGAAGGTCCAATGAGATCAAGAAGGTGACCAAGACGCCTGAAGAGAGGAGGAAAGAAATCGAAGTTCGAGTTGCAGCTGCAAGGTTGTTGCAACACAAGTCAGAGTCACCGCAATCTCAGAGCGAAGGAGATAGGGATGAGAGGACGACTTCTTCTGGTCATAGGAGGAAGAATGGACATGCCAGAAAGAATGGAACTTCGGGTTTAGTACAGTCATATTGGGATTCGATGAGTTTGGATATGAAGAAGGGCTTGCTTAGGATTAGAGTTTGTGATCTCATGTCACACTTTGGGTCTTTGAAGGATACTTTGCCAAAGGAGGTTTTATCAGAGGCTTTGTCCTATGCCGAGGAACACATGGGGAACCTGTTGCCGAAAATGCAGAGACTTTTGCCCCAGAATATTGACAATGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTCTGGACGTCTCTGCAGCTGTTAAAATGCTTGAAAATAGAGCAAAATTCAGAGATTCTTTATTCCCCAGGTATTCCTACTTGGGTCATTATGGAGAGGAGTACATGGATTGCTTTAAAGACACAATCTATTCTTGCCATGATAATGGAAGTACAGGGTATAGTCTTCATAATTGTACAACTGGAAGCAGTAAATATTGTAAAATTGCAGAAAGTGATATTAGAGGTGGAGTTGAAGTCCAAGGATCTACATTATGTCCCCTTGCTGATAGTTGGCCAATATCTGATGACTCTGAGCGTTCAAAACTTCTAGGGAAAATTCGTGCAGTATTTGAGATGCTTATTAGACACAAATATCTTGCTGCTAATCATCTAAACAAGGTCATACAATTTACTATGGATGAGATACAGGGCCTTCTTGGCGGTTCTCAACTCCTAAACCATGGTGTGGACCAAACACCAATGTGCATGTGCTTTCTGGGAGCTGCTCAGCTTAGGAAAATTCTCCAATTTTTGCAGGAGTTATCTCATGCTTGTGGTTTGGGTAGATATACTGACAAAACTAGTAGTCCCATGAATGATTTGCACAATATCAGTCAAGTTCCTGATATCAAAGAGAGGATTGTTCTTAATGGAGATGCATCATGCCTCCTTCTAGATGAGTGTTTACTGCCTACACAAGTCACTCCTGGTACAGCTCAGGGGGTTGTATTGGATGATGCAACTGCCCCAACTTCTCCTGATGGGGTTTCACACAATACCGATGCTTTGCTATCCTGGATATTTTCCGGTTCACCTAGTGGGGATCAATTGACATCATGGATGCGTACAAAAGAAGATAAAAGATGTCAAGGAATAGAAATTGTCCAGATGCTCGAGAAGGAGTTTTATCACCTCCAGGGTCTCTGTGAGAAGAAGTGTGATCGTGTAAGTTATGAGGAAGCTCTGCAGGAAGTAGAGGATATTTGTCTCCAAGAAGGTAAGAAGATGGAAAATGTTGGTGAATTTGTCCAGCGAAGCTATGAGTCTGTCTTAAGAAAGAGGAGAGATGAGCTCATTGAGAATGAAAATGATGTGATGTATGTTAGCAATAGGTTTGAGTTAGATGCTATTTCAAATGTTTTGCAAGAAGCAGAAGCAATTAATGTTAGTCAATTTGGTTATGAGGAAACTTATGCTGGTGTGACTTCTCAGCTATGTGATTTGGAATCTGGTGAAGATGAATGGAGAATGAAAGAATATTTACATCAAATGGATGGCTGTATAGAAATTGCTATTCAGAAACTGAAGGAGCACTTATCTATAGAGCTTAGCAAAATTGATGCACAAATCATGAGAAATGTTACAGAAATGCAGCAATTGGAACTCAAACTTGGGCCTAGTTCTGCTTATGATTATCGAGTGATATTATTGCCTCTAGTGAAGTCTTACCTAAGGGCTCTTTTGGAAGATTTGGCTGAGAAAGATGCAACAGAGAAGTCTGATGCCGCAAGAGAAGCATTGTTGGCTGAACTCGCCCATGATTCTAAGAAGATTGTTAAAGGGGGAAGCGAGAACACAAGACATATGGAGAAGACAAAAGATAAAAAGAAGAATAAAGATCATAGAAAAACAAAAGATTTAAATGCTGCAAGTGGTCGTGAACAGCTCTTGCCTCAAACTACAATTCCCGATTCCTATCCAGTTTCACCTGATAGCAACTATCAAGATTCTGAGGTGGTTGTTTCTATGAATGGTGATGGCTTTGATCAACAGGAAGAGGAATTTAGACGTAAAATTGAACTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAATTTCAACGGAGGATAGAAAATGAAGCTAAACAGAAGCTCCTTGCTGAGTTACAAAAGAAATCATCTGGGACATATTTAGAGAAAGCAGCAGACAGGCCTCAGGATTATCAATTGAAGGTGGTTTCTGGTGGCCCAGATGTACATGAACATATAAGAGCACCTATACAGGTGCAATTGGCAGAGGAGAATGGGTACCCAGGCAATCTGGATGGTGTGCTTATTACCAAAACAAATGGTTCAATGGGGCCAATTAAATCTTCAGCTGATTCAGCTGCCCAAAAGATTCATTATATGCATCATTCAAAAGCTAAACAAGATCTGGCTAATGGACTAGTTGCAGAGAACGGTTTTCAATTGCCTGATCGGCGCTCAGGAAAAAAACATAAGCAGCATAAGAATCCTTCCAGATTGGTTGATGGAAAGTTTGAACCTTTTGCGTTGGAAAAACAGAATGAGGTTACACATAATGGCAATCACTTAAGACAGCAGATTAAAGTCCATTACAACCAAGAGGCTAACAATGATGTTACTCATTATTCTTTGAAAAGGAAATCTTTGATGCATAATTATCCTCTGGGTGCTAGTTTATTGCACTATATAGATTGGGGGGACAATGGATCAAAGAAGGTGAAAGTGTTGCCAGTTGAAGATGATGAGGAGGAAAGATTCCAAGCTGATCTTAAAAAAGCTGTATGCCAAAGTCTAGATATGCATCAAGCACATAGGGAAGTGCCTTCAGTTTCCAGTTTGAGAACGTCTCAGACAGCTTCTTCAGAAGTAGATAGAGTGGGCTTTCCAGTGGAGGAAGAAACAACTGAGAATGTAAATGGAACTATCCTGATTGGTACTGGGCTAAAAAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCACTGTGGCATTTAAGACACTTCCGGGAGGAATTTCTTGGCAGATCAAAATCAGAGCATGATCATGTGGGTAGTCCTTGTGTTGTCTGTGCATTGTATGACATCTTTACTGCCATGGATGTTGCATCAAAGGATTCCAGGAGAGAAGCAGTAGCACCTACCTCCCTGAGGATAGCCCTTAGCAATCTATATCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAAGTACTAGCAGTGATATTTGACTGCCTCCATCGATCATTCACTTGTGGTTCAAGTGTTTCTGATTCAGAATCAGTAGAAAGCAACTGCATGGGATCTTGGGATTGTGCAAACAGTACTTGTATAGTACATTCAGTTTTTGGAATGGACATTTTTGAACGAATGAACTGCTATCACTGTGGTCTTGAGTCAAGGCACTTGAAGTATACTTCCTTCTTTCACAATATAAATGCCAATGCCCTTCGGACAATGAAGGTTATGTGCCCTGAAAGCTCCTTTGATGAGCTTTTGAATTTTGTGGAGATGAATGATCAGTTGGCTTGTGATCCAGAAGTTGGTGGTTGTGGCAAGCTCAACCACATCCATCACTTTCTTTCAACTCCACCACATGTTTTCATGACAGTTCTTGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACTGCAACTGTTGAAGCCCTGAGCACTGAGATGGATATCAGTATCCTTTATCGTGGTTTAGATCCTAAAAGCACCCATAGCTTGGTTTCAGTGGTTTGCTACTATGGGCAGCATTATCATTGCTTTGCTTATAGCCATGACCATGAACAATGGATTATGTATGATGATAAGACTGTCAAGATAATTGGTGGATGGGCTGATGTTCTTAAAATGTGTGAAAGAGGGCATCTACAACCTCAGTTTATGGTAAGGCCCTGTTTACGCAGATGCTTTTCTGCTTACACACGTGGCTTTGGAAGTAAAGGTATGAGTTTCTGTGGTGTCAACAAGTTTTGGGGAGAATCATGCCCAAAGCATTTTTTGACTCAGTGGATGAAATCGGACATTGAAGAGCCCAGATAG 5016 0.432 MGQKKRNSAPRSKSSLASAQATAVATTVSAEGESNTVADQSPDKNEFTTPQSAFPSHSAIKAECERALTALRRGNHTRALKLMKDCCSRHENSPHSAFVHRVHGTVWVKVAAVMDDPSAKQRHLKNAVECGRKAVELSPNSIEFAHFYASALFDTANEGKEFEEVVHECERALAVEKPNDPAKESLQDESQQKIPTAEARVLHVQNELRQLIQKANIASLSSWMKHLGNGEEKFRLIPIRRPTEDPMEVRVVQSRRSNEIKKVTKTPEERRKEIEVRVAAARLLQHKSESPQSQSEGDRDERTTSSGHRRKNGHARKNGTSGLVQSYWDSMSLDMKKGLLRIRVCDLMSHFGSLKDTLPKEVLSEALSYAEEHMGNLLPKMQRLLPQNIDNEWIEMILNCSWKPLDVSAAVKMLENRAKFRDSLFPRYSYLGHYGEEYMDCFKDTIYSCHDNGSTGYSLHNCTTGSSKYCKIAESDIRGGVEVQGSTLCPLADSWPISDDSERSKLLGKIRAVFEMLIRHKYLAANHLNKVIQFTMDEIQGLLGGSQLLNHGVDQTPMCMCFLGAAQLRKILQFLQELSHACGLGRYTDKTSSPMNDLHNISQVPDIKERIVLNGDASCLLLDECLLPTQVTPGTAQGVVLDDATAPTSPDGVSHNTDALLSWIFSGSPSGDQLTSWMRTKEDKRCQGIEIVQMLEKEFYHLQGLCEKKCDRVSYEEALQEVEDICLQEGKKMENVGEFVQRSYESVLRKRRDELIENENDVMYVSNRFELDAISNVLQEAEAINVSQFGYEETYAGVTSQLCDLESGEDEWRMKEYLHQMDGCIEIAIQKLKEHLSIELSKIDAQIMRNVTEMQQLELKLGPSSAYDYRVILLPLVKSYLRALLEDLAEKDATEKSDAAREALLAELAHDSKKIVKGGSENTRHMEKTKDKKKNKDHRKTKDLNAASGREQLLPQTTIPDSYPVSPDSNYQDSEVVVSMNGDGFDQQEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQKLLAELQKKSSGTYLEKAADRPQDYQLKVVSGGPDVHEHIRAPIQVQLAEENGYPGNLDGVLITKTNGSMGPIKSSADSAAQKIHYMHHSKAKQDLANGLVAENGFQLPDRRSGKKHKQHKNPSRLVDGKFEPFALEKQNEVTHNGNHLRQQIKVHYNQEANNDVTHYSLKRKSLMHNYPLGASLLHYIDWGDNGSKKVKVLPVEDDEEERFQADLKKAVCQSLDMHQAHREVPSVSSLRTSQTASSEVDRVGFPVEEETTENVNGTILIGTGLKNEVGEYNCFLNVIIQSLWHLRHFREEFLGRSKSEHDHVGSPCVVCALYDIFTAMDVASKDSRREAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTCGSSVSDSESVESNCMGSWDCANSTCIVHSVFGMDIFERMNCYHCGLESRHLKYTSFFHNINANALRTMKVMCPESSFDELLNFVEMNDQLACDPEVGGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATVEALSTEMDISILYRGLDPKSTHSLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKIIGGWADVLKMCERGHLQPQFMVRPCLRRCFSAYTRGFGSKGMSFCGVNKFWGESCPKHFLTQWMKSDIEEPR 1671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi799g00005 1671 MobiDBLite consensus disorder prediction 950 971 - -
Sebi799g00005 1671 MobiDBLite consensus disorder prediction 915 971 - -
Sebi799g00005 1671 MobiDBLite consensus disorder prediction 1 54 - -
Sebi799g00005 1671 MobiDBLite consensus disorder prediction 1128 1147 - -
Sebi799g00005 1671 CDD Peptidase_C19 1384 1600 - -
Sebi799g00005 1671 MobiDBLite consensus disorder prediction 915 930 - -
Sebi799g00005 1671 SUPERFAMILY Cysteine proteinases 1293 1608 IPR038765 -
Sebi799g00005 1671 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1620 - -
Sebi799g00005 1671 MobiDBLite consensus disorder prediction 292 308 - -
Sebi799g00005 1671 Pfam Protein of unknown function (DUF627) 66 176 IPR006866 -
Sebi799g00005 1671 Pfam Protein of unknown function (DUF629) 324 372 IPR006865 -
Sebi799g00005 1671 Pfam Protein of unknown function (DUF629) 371 826 IPR006865 -
Sebi799g00005 1671 MobiDBLite consensus disorder prediction 283 321 - -
Sebi799g00005 1671 Coils Coil 988 1022 - -
Sebi799g00005 1671 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1293 1623 IPR028889 -
Sebi799g00005 1671 Gene3D Cysteine proteinases 1278 1617 - -
Sebi799g00005 1671 Pfam Ubiquitin carboxyl-terminal hydrolase 1294 1600 IPR001394 GO:0004843|GO:0016579
Sebi799g00005 1671 Gene3D Tetratricopeptide repeat domain 47 218 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi799g00005 Sebi-Chr799 59947 69195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi799g00005 55 1621 C2H2 Transcription Factor Family AT3G47890 54.074 0.0 1606