Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi798g00024 ATGGCAGAAAGACTACTCAGCCTTTCTTTTCTGGTCCTGAGCCTTGTCCTTTACATGGCTGCTAGCACTGCAGAATCCGCAGTTGCAAGAAGACCCAACCCCAACCCAATAGACTTCATAAAATCCTCATGCAGGGCCACACTCTACCCTGCTGTGTGCGTTCAAAGCCTCATGGGTTATGCAAACGTGATTCGCCAAGACGAGCATCAACTAGCCATCACAGCCTTGAATGTGAGCGTATGGAGGACTCGTTCAAGTGCATCATTTATGAAGAAAATGAGCAAGGTAAAGGGGATTAAGCCTAGGGATTACGGTGCTGTACAAGACTGCAAAGAGAACATGGATAATAGTGTGGACCGTCTTAACCAATCGGTTAAGGAGCTTGGGCTTACGGGTAAGGCCTTGGGCCAGGACCCAATGTGGCACATGAGTAACGTTCAGACTTGGGTCAGTGCTGCTCTAACGGATCAGAACACGTGTCTTGATGGGTTTGCCAGTCCTCACGTGGATAGAAAGTTGAAGGCTACCATTAGTGCCAGGGTTGTTGATGTTTCTCAAGTCACTAGTAATGCTCTTGCATTGGTTAATCGCTTTGCCTCCAGGTACCGTACTGCTGCACACAACTGA 627 0.4833 MAERLLSLSFLVLSLVLYMAASTAESAVARRPNPNPIDFIKSSCRATLYPAVCVQSLMGYANVIRQDEHQLAITALNVSVWRTRSSASFMKKMSKVKGIKPRDYGAVQDCKENMDNSVDRLNQSVKELGLTGKALGQDPMWHMSNVQTWVSAALTDQNTCLDGFASPHVDRKLKATISARVVDVSQVTSNALALVNRFASRYRTAAHN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi798g00024 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 198 IPR035513 -
Sebi798g00024 208 Pfam Plant invertase/pectin methylesterase inhibitor 38 194 IPR006501 GO:0004857
Sebi798g00024 208 CDD PMEI-like_3 42 200 - -
Sebi798g00024 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 194 - -
Sebi798g00024 208 NCBIfam pectinesterase inhibitor domain 7 196 IPR006501 GO:0004857
Sebi798g00024 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 198 IPR035513 -
Sebi798g00024 208 SMART PMEI_2 35 194 IPR006501 GO:0004857
Sebi798g00024 208 FunFam Pectin methylesterase inhibitor 1 35 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi798g00024 Sebi-Chr798 363192 363818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi798g00024 19 195 Carbohydrate Esterase AT3G14310 28.333 1.06e-22 93.6