Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi798g00017 ATGATCAGGAAGCCCCACAAGTGTCTTGCCTTGAACCCCATCTATGTAATCTTCAAATTGGTGCGGTGTCTTGGACCAGGAACCAATGGATTGTGTTTTCTAAATTGGGAACCCAAGTATCTACGGTTGGGCCATAGCCCAATAGAACTACCAAAGGGACATTTGGCAGTGTACGTGCGCGAATCCGAGGAAGAGAAGCAACGGGTATTGGTACCTGTTACATTCTTCAATCACCCTCTGCTTCGAAAGCTATTGGAGGAGGCAGAGAAAGTTTATGGGTTCGATCATCCTGGTGTGATAACTATACCCTGTGAAATCTCCGAGTTTGAGAGAATTCAGAAGACTATTGCCACCACACAAGGCTACTATTGGAAGCGTAGCTTTGATGTTCCGTCCCGTAGGAAAAAAGTGAAAGAAAAATGA 423 0.4515 MIRKPHKCLALNPIYVIFKLVRCLGPGTNGLCFLNWEPKYLRLGHSPIELPKGHLAVYVRESEEEKQRVLVPVTFFNHPLLRKLLEEAEKVYGFDHPGVITIPCEISEFERIQKTIATTQGYYWKRSFDVPSRRKKVKEK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi798g00017 140 Pfam Auxin responsive protein 48 114 IPR003676 GO:0009733
Sebi798g00017 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 44 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi798g00017 Sebi-Chr798 281955 282377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi798g00017 47 116 Calmodulin-binding Proteins AT3G43120 48.571 1.42e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi798g00017 K14488 - gmx:102668727 173.326