Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi798g00009 ATGCTTAGCCGATTGCATCACCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCATGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAGTGGAAGTTTGGAAGCTTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATAAAAATTGCTCTTGATGCTGCAAGAGAACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAAATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTTAGTCTCAGTATATTCTTTCTTAGAGTTGTTATTGCCAGAGTTTAGAATTTTTGAGGCTAGACCAATCTTGAGAGACAAGGACCGGCTGGAAGAGATTGTTGATCCCAAACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTTCGTGTGTGCACTATTGTTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAACGCATCACAGAATATCAAGATTCTATGTTAGCCTCATCTAATACACGGCCAAACCCGAGACAGTCCTCTAGCACTTTTGAGTTTGACAGAACATCTTCAATGTTCTCATGTCCTTACTCTGGTCTAAGTGCTGCCTTTGACAATGAGAACATTTCTAGGACGGTGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 807 0.4238 MLSRLHHRNLVKLVGYYSSHDSSQNLLCYELVPSGSLEAWLHGPLGINCPLDWDTRIKIALDAARELSYLHEDSQPCVIHRDFKASNILLENNFHAKVANFGLAKQAPEGRSNYLSTRVMGTFGLVSVYSFLELLLPEFRIFEARPILRDKDRLEEIVDPKLGGKYPKEDFVRVCTIVAACVAPEASQRPTMGEVVQSLKMVQRITEYQDSMLASSNTRPNPRQSSSTFEFDRTSSMFSCPYSGLSAAFDNENISRTVVFSEDLHEGR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi798g00009 268 Gene3D Transferase(Phosphotransferase) domain 1 133 221 - -
Sebi798g00009 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Sebi798g00009 268 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Sebi798g00009 268 PANTHER OS01G0750732 PROTEIN 1 218 - -
Sebi798g00009 268 SUPERFAMILY Protein kinase-like (PK-like) 1 240 IPR011009 -
Sebi798g00009 268 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi798g00009 268 MobiDBLite consensus disorder prediction 211 230 - -
Sebi798g00009 268 Pfam Protein tyrosine and serine/threonine kinase 1 114 IPR001245 GO:0004672|GO:0006468
Sebi798g00009 268 FunFam Os07g0541700 protein 32 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi798g00009 Sebi-Chr798 115598 116840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi798g00009 1 268 Receptor kinase-like Gene Family AT4G02010 73.667 9.35e-148 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi798g00009 PK_Tyr_Ser-Thr 2.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi798g00009 - - jre:108992148 442.965