Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi798g00004 ATGGATTTGAAGTCCTCTCATGCTTCTCCTATTCTTACTGATCCTGTTCCCATCAACAAGTCAAGGCTTGGAATCCGTTCTAATCTGCTAGCTTGTTCCCAGCAAGATTCATCACTCTCTCCAGCAAAGTACACAAAAAGCAATTCAAGGAAAAGTACAGGGAGTCTTGATGATGTTAGGCATAATGGTTGGTTGGATGCCATGAAGGCCTCTTCACCTCCAAGGAAGAAGCTACTTAAAGGTTCCAGTGCTCAGGTTGCTTCAATTGATTATGACATTGAAGACTATAATTCATGGACACTGGGATATCCTTCAGCACTAGACTCTTTTGAGGAAATTATTGACCGTGCAAAGAATAAGAAGATTGCAATGTTTCTAGATTATGATGGCACACTTTCTCCAATAGTAGATGATCCAGATTGTGCCTTTATGTCTGAATCTATGCGTGCAACTGTGAGAAAAGTAGCAAAGTATTTCCCTACAGCAATCATCAGTGGAAGAAGCCGTGACAAGGTTTTTGATTTAGTTAAACTGACAGAACTCTACTATGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTTAATGACACTCTGTCCAAAGTCCATCCAAATTGTGCCAAGTCTACCGACCATCAGGGAAAGGAGATAACTCTCTTTCAACCTGCAAGTGAATTCCTCCCTATGATTGATGAGGTTTTTAGAACCCTCATCGAGATTACTAGAGATATAAAAGGCGCAAAAGTTGAAAATCACAAGTTTTGCGTTTCTGTACATTATCGTAATGTAGAAGAGAATAATTGGACAACGATTGGTCAACGTGTCCATGATATCTTAAAAAATTACCCTCGTTTATGTTCAACTCATGGGCGGAAGGTTTTAGAAATTCGTCCTGTAATAGACTGGAACAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTTTAGGGTTAACAGATAGGAATGATGTTCTTCCCATCTACATTGGAGATGATAAAACTGATGAAGATGCATTTAAGGTGTTGCGGGAGAAGAATCAAGGTTATGGCATTTTGGTTTCATCAGTGAGAAAAGAAAGCAATGCCTTCTACTCTCTGCGAGATCCCACTGAGGTTATGAAGTTTCTCCAACTCTTGGTGAATTGGAAGAGGCAACAAGAAAGGAAGCATGGGAAGAAATAA 1179 0.3978 MDLKSSHASPILTDPVPINKSRLGIRSNLLACSQQDSSLSPAKYTKSNSRKSTGSLDDVRHNGWLDAMKASSPPRKKLLKGSSAQVASIDYDIEDYNSWTLGYPSALDSFEEIIDRAKNKKIAMFLDYDGTLSPIVDDPDCAFMSESMRATVRKVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVNDTLSKVHPNCAKSTDHQGKEITLFQPASEFLPMIDEVFRTLIEITRDIKGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDILKNYPRLCSTHGRKVLEIRPVIDWNKGKAVEFLLESLGLTDRNDVLPIYIGDDKTDEDAFKVLREKNQGYGILVSSVRKESNAFYSLRDPTEVMKFLQLLVNWKRQQERKHGKK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi798g00004 392 NCBIfam HAD-IIB family hydrolase 124 342 IPR006379 -
Sebi798g00004 392 FunFam Trehalose 6-phosphate phosphatase 223 299 - -
Sebi798g00004 392 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 42 389 IPR044651 GO:0004805|GO:0005992
Sebi798g00004 392 FunFam Trehalose 6-phosphate phosphatase 122 210 - -
Sebi798g00004 392 Gene3D - 222 392 IPR023214 -
Sebi798g00004 392 Gene3D - 122 213 IPR023214 -
Sebi798g00004 392 NCBIfam trehalose-phosphatase 120 379 IPR003337 GO:0003824|GO:0005992
Sebi798g00004 392 SUPERFAMILY HAD-like 123 383 IPR036412 -
Sebi798g00004 392 CDD HAD_TPP 123 373 - -
Sebi798g00004 392 FunFam Trehalose 6-phosphate phosphatase 229 388 - -
Sebi798g00004 392 Pfam Trehalose-phosphatase 125 368 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi798g00004 Sebi-Chr798 39623 42326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi798g00004 118 378 Trehalose Biosynthesis Gene Families AT1G70290 26.449 3.25e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi798g00004 K01087 - qsa:O6P43_024315 606.675