Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi796g00029 ATGTGGGGTTTCATTTGGATTCTATGTTTCTTGAAGGATTTAGCTAAGATAGACCAAGCTTGGATTGTGATCCCTAGCAGTGGTAGGACGTTTTTGGAGACTTTTGAAGTTGTAGAGAATGCAGCAAGATCACAGAAAAAAGGTGCACCATACATGGTTGACTCTCCAAAATCATTTTGTACGTTGGTGAATTGGGGAAGAGAAAAGAATTCAGCGGAGATGGATTTCTTCTCCGAATATGGCGATGCCAGCAGGTACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTATGGTGTGGTTTGTTCAGCCATTGACACTCACACTGGCGAAAAGGTTGCAATAAAAAAGATTCACAATATCTTTGAGCATATATCTGATACTGCACGTATTCTCCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCACGTCATGCTTCCTCCTTCTAGGAGGGACTTCAAAGATATTTTTGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTATACCAGTTACTTCGAGCATTGAAGTATATTCACACCGCTACAAGGTGGTATAGGGCACCAGAGCTCTGTGGATCATTTTACTCAAAGTATACTCCAGCAATTGATATGTGGAGTATAGGTTGCATCTTTGCTGAAGTATTGATAGGAAAACCGCTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATTACAGATCTGCTTGGAACTCCCCCACTGGATACGATATCCCAGGTACGCAATGATAAGGCAAGGAGATACCTAACTAATATGAGGAAAAAGCAGCCTGTACCATTTGCACAAAGATTTCCTAAAGCAGATCCTTTATCACTACGACTATTGGAAAGGTTGCTCGCCTTTGATCCAAAAGATCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTATTTCAAGGGACTTGCAAAAATCGAGAGGGAACCATCCTGCCAGCCTATTACAAAACTGGAGTTTGAATTTGAAAGGCGGAGAGTCACAAAGGAAGAAATTCGAGAGTTAATTTTCCGTGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTGCACAAATGGAACAGAAACAACTAATTTTCTTTATCCAAGTGCCGTTGATCAATTAAAAAATCAGTTTGCTCATCTTGAGGAAACTGGTGGTAAAAGTGATCCAGTTATGCCACTTGAAAGAAAGCATGCATCACTTCCCAGATCAACAATTGTACATTCAAACATGGTATCCCCAAAAGAGCAATCAAACATTGCTTCCTGCAAAAACCGGCAAACAGCTGAGGAATTAATCAATACACTAGCACTTTTCTTTTCAGAAAAACCTGGTAAAGTTGTTGGGCCAATTGTTCAATATGAGTATGGAAGTGTAGTCAAGGGTTCATATGATCCCAGGACATTTATCAGAGGTTATGTTCTTCCTTCTCAATCTATTCCCAACTGCATATTATCATCAAATATGAAATCCAGAAAGCCATTGACACAAACATGCTGCAGTCAAAAGGCTCAAAATGGTGGGATTAGTGCTGCTGCTGGTGCCACACAGCTCATAATAGAAAAGTTGGACTTGTTCAGTATGGTATGA 1668 0.3987 MWGFIWILCFLKDLAKIDQAWIVIPSSGRTFLETFEVVENAARSQKKGAPYMVDSPKSFCTLVNWGREKNSAEMDFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHNIFEHISDTARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTATRWYRAPELCGSFYSKYTPAIDMWSIGCIFAEVLIGKPLFPGKNVVHQLDLITDLLGTPPLDTISQVRNDKARRYLTNMRKKQPVPFAQRFPKADPLSLRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKLEFEFERRRVTKEEIRELIFREILEYHPQLLKDCTNGTETTNFLYPSAVDQLKNQFAHLEETGGKSDPVMPLERKHASLPRSTIVHSNMVSPKEQSNIASCKNRQTAEELINTLALFFSEKPGKVVGPIVQYEYGSVVKGSYDPRTFIRGYVLPSQSIPNCILSSNMKSRKPLTQTCCSQKAQNGGISAAAGATQLIIEKLDLFSMV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi796g00029 555 FunFam - 205 279 - -
Sebi796g00029 555 Gene3D Phosphorylase Kinase; domain 1 355 377 - -
Sebi796g00029 555 ProSitePatterns Protein kinases ATP-binding region signature. 92 116 IPR017441 GO:0005524
Sebi796g00029 555 Gene3D Phosphorylase Kinase; domain 1 64 208 - -
Sebi796g00029 555 Pfam Protein kinase domain 206 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi796g00029 555 Pfam Protein kinase domain 86 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi796g00029 555 Gene3D Transferase(Phosphotransferase) domain 1 209 354 - -
Sebi796g00029 555 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 206 366 - -
Sebi796g00029 555 FunFam Mitogen-activated protein kinase 76 180 - -
Sebi796g00029 555 SUPERFAMILY Protein kinase-like (PK-like) 83 335 IPR011009 -
Sebi796g00029 555 ProSiteProfiles Protein kinase domain profile. 86 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi796g00029 Sebi-Chr796 338567 343578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi796g00029 66 460 MAP Kinase Gene Family AT2G42880 73.696 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi796g00029 Pkinase 1.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi796g00029 - - gmx:100781115 736.102