Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi796g00025 ATGGGGAAAAACCAGAGGGGGAAGAAGAAGAGCGAAGATTTGAGGTCCCTGATGCAGGTGTCCAATCGTTCAGAGGAAGAAATCTTGGCTGAAAACGTTACCGCTGATAGGCTTCTTGCTGATTGGTTCCTTAACAGTGATGAGCGTCAACAAGCGAACAGCCAAAGTAGAAAAGGAAAAGAGGTTTTAGAATCAACGTCAGGGGCTAATGATGAAGACAAAGCTGGTGGTAATGAACAGAGTGAATCAACACACGGGACTGATGATGAACGGGGTAAAACAGCAGAGGAAGGAGACCTAGGGTCAGATTTTCCTCCACTTCCATCATCCGCAGCAAATGTTGTTATAAGGAACAATTATGTATGGTTTCTCACAAATGCTGCTACTGCTATGTATGTTTCATACCCTGACATATTGATGGGATGCATAACTCACTGTGAGGGACAGTCATCAGGAACAGCTGATTCCACATCAGTGTCTGCCCAAGTCCCTCCAGGATCTCAAACATCTTGGCTAGGAGGGACAAGAGGACGGATATCTTTTGCAGACAAGTTAAAGGGTGGGCCATCTCGAGGTGCTGTTCTTCATAACCCTTCTAATGCCTCAGGAACTTCTGCATCTGAAACGTTAGAGTCAAGCTCAAATCCTCCATGTCATAATCATTCTGAGCAGCCAAATACTGACAATTCACAAACATTAAACATGACTGCATCATCAAATGCTAATGAGCCATCTGAGCATCAAAGTTTGAATGATACTGCTGCTGCAGTTAGTTTGGGCGGGGACAGTGAATTAGATGCTGCCCAAGATCCACCTGCGGATCTTGCTGGTGGTATTTTGGATGAAATTGATTCTATTATGAGCAGAATTGATTGTCAGAGTTCTGATGAGCACCACAGAGAGAGCAATATAGAAGTTGGTGCAGGTAATATTCGATTCAGGCCATTATTGACTAGTGATGCCTTTGTAGATGTGCGATCACCAGAGAATAACAGTTCAGTGCGTTATGCAAGTCATATACGAGACTTCGCTGATGACTCTCAACTCTTCAATTTTGCTTTATTTGAATATAAAACTATTTTTCCTGAAAGCCACCAGTCTTTGTCATCTCCTTCCCTGTCTCCTGCAAGAGAAGCAACTGTTGATACAAGTCTTTTCTCTCCATTGCAAAATCCTAGAAGGTCCCAGTCTCATTCATCTCTTCCCGGCCCCCCTGATGATCGTGGAAGCTTTCAGTCTAATCCAACTCGTCGTCATTTTAGTTCCCCTAACTTCAATCAGAATGATGGTGCACGTAACTTAAGAGGCAGAGGCTCTATACAACGGGTTAGGACACCCCCCCAAAATTTTATGGCTCAGTCCTCAACACGCATGGAACAATTTGTCAATGCAAGACCATATCACCCTCTACACCAGAACCAGCCATATACAACAACCATGCATCCGTCTATAGAACACGCTCCAGAGCAAGCTTTACTAGGTAGTAATGTATATGGATATGACCAATCTTCAGCAAGCATGAACTACAACTACAACCCTCCACAAAATAGAAATGAATTCCCTGTGAGCGGATTGCCTCCTTATCGAAGTCTTCGATATCCCTTCTATGGTCCTTCAAGTAACTTAAATCAGTTTTTACCTTCTCAGCATCATGGTGCCCGTAACATTAGAAGCTCTAATCAACGGCATGGTGCCCTTTCTCCACCACCGGAATATTATGGTCCCTTTTCTCCACCACGGGATTATGAGGCTGGCCCAAGTTCTTTGCTTATAGAAGGGGCCAGACATTATGGTTTACAGATGCTTGGCGTTAATTCAATTGTACATACATTAGAGAGAATTGAGCATGCCTTCTGTGATTCTGGCATGATACTGTATGACACGAGGCGCCATGGTTTTTTTCCTTTAAAGGGCAATATCCCAAAGTGTCTTGTGTTTAGTGAAATGGATAGAAAGCAAGAACAGGACAAGGGGAACCTGAATATGTCTGGCATTGATGTTACTCTAACATCTCCCAAAGTTCCAAAAGCAGTTTCACCAGTTTCTTCTGCAGCAGAGGGGGAAACCTTGAGGCGACCTCGTGGCCGGCCGGCTGGCTCTAAAAACAAACCTAAGCCACCAATAATTGTCACCAGAGACAGTGCTAATGCACTCAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAAAGTTTGTTAAACTTTGCAAGAAGAAAGCAACGTGGCCTTTGCATACTTAATGGGACTGGCTGTGTAACAAATGTAACACTGCGCCAGCCAGCTTCATCTGGTGCCATTGTGACCCTTCATGGTCGTTTTGAGATTCTCTCATTGCTGGGGTCAATCCTTCCCCCACCAGCACCACCAGGAATCACAGGGCTTACAATATACTTAGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTAGTTGGTGCTTTGATTGCTTCAGGCCCAGTTGTAATCATGGCTGCATCATTCATGCATGCTACTTATGATCGTCTGCCACTTGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCATCATCTTGATATCTCAGACTTATATGCAATGCCACAAAATCTGCTCATGAATGGTGCTATGCCCCCAGAGATATACTCTTGGGCACCAGGGAAGAACTTGTCAAAAACCTGA 2691 0.4456 MGKNQRGKKKSEDLRSLMQVSNRSEEEILAENVTADRLLADWFLNSDERQQANSQSRKGKEVLESTSGANDEDKAGGNEQSESTHGTDDERGKTAEEGDLGSDFPPLPSSAANVVIRNNYVWFLTNAATAMYVSYPDILMGCITHCEGQSSGTADSTSVSAQVPPGSQTSWLGGTRGRISFADKLKGGPSRGAVLHNPSNASGTSASETLESSSNPPCHNHSEQPNTDNSQTLNMTASSNANEPSEHQSLNDTAAAVSLGGDSELDAAQDPPADLAGGILDEIDSIMSRIDCQSSDEHHRESNIEVGAGNIRFRPLLTSDAFVDVRSPENNSSVRYASHIRDFADDSQLFNFALFEYKTIFPESHQSLSSPSLSPAREATVDTSLFSPLQNPRRSQSHSSLPGPPDDRGSFQSNPTRRHFSSPNFNQNDGARNLRGRGSIQRVRTPPQNFMAQSSTRMEQFVNARPYHPLHQNQPYTTTMHPSIEHAPEQALLGSNVYGYDQSSASMNYNYNPPQNRNEFPVSGLPPYRSLRYPFYGPSSNLNQFLPSQHHGARNIRSSNQRHGALSPPPEYYGPFSPPRDYEAGPSSLLIEGARHYGLQMLGVNSIVHTLERIEHAFCDSGMILYDTRRHGFFPLKGNIPKCLVFSEMDRKQEQDKGNLNMSGIDVTLTSPKVPKAVSPVSSAAEGETLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATYDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGAMPPEIYSWAPGKNLSKT 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi796g00025 896 MobiDBLite consensus disorder prediction 149 251 - -
Sebi796g00025 896 Pfam Plants and Prokaryotes Conserved (PCC) domain 720 830 IPR005175 -
Sebi796g00025 896 CDD DUF296 721 801 IPR005175 -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 1 20 - -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 195 251 - -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 49 63 - -
Sebi796g00025 896 Gene3D - 719 854 - -
Sebi796g00025 896 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 676 858 IPR014476 GO:0003680
Sebi796g00025 896 MobiDBLite consensus disorder prediction 149 175 - -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 49 109 - -
Sebi796g00025 896 SUPERFAMILY AF0104/ALDC/Ptd012-like 715 847 - -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 386 452 - -
Sebi796g00025 896 ProSiteProfiles PPC domain profile profile. 715 853 IPR005175 -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 75 98 - -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 675 708 - -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 386 434 - -
Sebi796g00025 896 MobiDBLite consensus disorder prediction 1 30 - -
Sebi796g00025 896 FunFam AT-hook motif nuclear-localized protein 718 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi796g00025 Sebi-Chr796 275808 281286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi796g00025 674 893 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 74.208 2.91e-97 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi796g00025 - - gmx:100804941 429.098