Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi796g00023 ATGCAGGAGCCCCTTCTGAGCCTTTTCTCCAGGAAAGGAGAATCACATTCACTATCACCCAAGGAACAATCTGCCCATGATCTTGCTCTTGCCCCATCACTGCCTCAATCAAGTTCTCCTCATATCATCAATGAAGCCAAGACCAAGAGCCCTCCTTATATTAACCTCATAGCCAACTTGAGCTTCAGGAAAGGGAAGATTACTCATCGCTCCCGTTCTGCTCCATCCATATTATTCACTGACACAAGGGTAGATTTTCATGAGCCCTCTGAATCCAAACCTGCAAACAAGTCATCAACTTTAATAGTTAGGATATCTTTCATTGGTGTTTTCTTGTATGTGGCAACTGGGGTTGTAGTGTACTTGACAAGTGGGAGTTTCAAGGGCACTACCTCATTCAGGCCTGTAGATGCTGTTTACTTTACAGTGGTAACTCTCTGCACTATTGGATATGGTGATATTGTTCCTGACTCCATATTTACCAAGATGTTTACATGTGGTTTCATTTTGGTGGGTTTTGGATTTGTTGGTTTTCTGCTTAATGGGTTGGTTGCATACATTTGTGATACACATGAGGCATTCTTATTAAGCATGATGGATGAGAATCGATATAAGAAAATTCTCAGGACATATATGGTTGATGTTGAGAAAGGAAGAATGAGGATAAGAACTAAAGTTTGTCTATCTTTGGCTATTGTCATTGGCTGCATTGTTATAGGAACAGTTGCTGCACGCTTTCTAGAGGATCTAAATTGGGCTGACAGCTTTTATCTCTCCATTACTTCTGTTACAACAGTTGGTTATGGGGATTATGCTTTCAGAACTGTAACTGGAAGATGTTTTGCAAGTCTATGGCTTTTGGTAAGCACACTGGCAGTTGCCAGGGCCTTTCTCTACCTCACTGATTATAGCATTAACAAGAGAAGTCGTGAGATGGCAAAGTGGGTTCTTCAGAAGAAGATAACCTTATCAGATTTAGCAGCTGCAGACCTTGATAATGATGGATCAATCAGTAAGTCTGAATTTGTGATATACAAGCTTAAGCAAATGGGGAAGATTACTGAGATAGACATTCTGCAAATAAGCAAACAATTTGATTCATTGGACCATGGCATGTATGGCAAGATTACTCTAGCTGATCTCATGGAAAAGCCATACCCCATCAGTGGAGTGACTGTTGCTGCAACTAAAAGCTGA 1197 0.4085 MQEPLLSLFSRKGESHSLSPKEQSAHDLALAPSLPQSSSPHIINEAKTKSPPYINLIANLSFRKGKITHRSRSAPSILFTDTRVDFHEPSESKPANKSSTLIVRISFIGVFLYVATGVVVYLTSGSFKGTTSFRPVDAVYFTVVTLCTIGYGDIVPDSIFTKMFTCGFILVGFGFVGFLLNGLVAYICDTHEAFLLSMMDENRYKKILRTYMVDVEKGRMRIRTKVCLSLAIVIGCIVIGTVAARFLEDLNWADSFYLSITSVTTVGYGDYAFRTVTGRCFASLWLLVSTLAVARAFLYLTDYSINKRSREMAKWVLQKKITLSDLAAADLDNDGSISKSEFVIYKLKQMGKITEIDILQISKQFDSLDHGMYGKITLADLMEKPYPISGVTVAATKS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi796g00023 398 Gene3D - 192 329 - -
Sebi796g00023 398 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Sebi796g00023 398 FunFam Two-pore potassium channel 3 209 323 - -
Sebi796g00023 398 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 136 360 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi796g00023 398 MobiDBLite consensus disorder prediction 1 27 - -
Sebi796g00023 398 PRINTS Two pore domain K+ channel signature 144 172 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi796g00023 398 PRINTS Two pore domain K+ channel signature 264 273 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi796g00023 398 FunFam Two-pore potassium channel 2-like 101 197 - -
Sebi796g00023 398 SUPERFAMILY Voltage-gated potassium channels 199 320 - -
Sebi796g00023 398 SUPERFAMILY Voltage-gated potassium channels 98 187 - -
Sebi796g00023 398 Pfam Ion channel 233 302 IPR013099 -
Sebi796g00023 398 Pfam Ion channel 110 186 IPR013099 -
Sebi796g00023 398 Gene3D - 90 190 - -
Sebi796g00023 398 SUPERFAMILY EF-hand 326 382 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi796g00023 Sebi-Chr796 266718 268511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi796g00023 64 383 Ion Channels AT4G18160 49.844 1.35e-110 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi796g00023 K05389 - gmx:100789639 560.836