Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi792g00023 ATGTTGTCCAGAATTGCTCTTTTCCTTTCCTTTCAAATTTTCATCTGCACTCTGAAGTTTCAATCCTCAGAAGCTCAATCATGGTTCAAAATCGGTTACTGGTATTACGGCTCTGGATTTCCCATTTCTGATATCAACTCTGCTCTCTACACACACCTCATATGTGCTTTTGCTGATGTCAACACTTCCTCCTTTGAGCTCTCTATCCCCTCATCAAATGCACAACCCTTCTCCACTTTCACAACCACTGTCAAACTCAAGAACCCATCCATCACTACCCTTCTCTCCATTGGTGGAGACCAAAACAATTTAGCCATCCAATCCATGATTAAAAACGCTTCTTCAAGGAAACCCTTCATTCAATCTTCAATAAGAATAGCTAGACTTTATGGATTTCAAGGCTTGGACTTGTCCTGGCCCACCATTGAGACAACCTCTGATGCCTACAATTTGGGACAGCTTTTCCAAGAGTGGCGTGCTGCTGCAAAATCTGAGGCAGAAAAAACAAACAATTCCATACTTCAAGAATTGATTTTGACTGCAGCTGTTCTAGGTTCACCTTATTTGGAAATTGGGTCTTACCCAATGGAGTCAATTAGGAGTAATTTGAATTGGGTACATGTTAATGCTTATGATTACCATACACCATTGGGACAGAACTTCACTGGTGCACCTTCAGCTTTATATGACCCTGCAAGTGATTTCAATACAGATTACAATATTAAGGCATGGATCGGGAATGGGTTAGCAGCTAACAAGTTGATTTTGGGTTTGCCTTTCTATGGATATGTATGGAAACTCCAAAACCCCAATAATAATGCAATAGGTGCACCAGCAACAGGTCCAGCAGATGGTGAAGATGGATCTAGAAGTTATAAGGACATAAAAAATAATATTCAGCAAAATGGAGGTGTGGTACTGTATAATGACACTTATGTAACAAATTACTGCTCATATGGATCAAATTGGATTGGCTTTGATGATGTTAAGGTTGTTCAAAAGAAGGTGTCATATGCCAGGGAAAAACAGCTACTTGGCTATTATGTGTGGCAAGTTTCCCATGATGACGATAAGTGGACACTTACCAGTGCAGCTGCAGCTGAACAGATTGGCAACCACAAAAAGAACAGGTGGAAAACATTAGTGATCATTTTGAGTATCACTGCTACAGTTATTGTCATCTTAACAATCTACTACCAAAGGAAGAGAATATTCAAATCAACTGGAACGGTTAGTGCTGCAAAATATTCTGGCTCTGAATGGAATAAAAATGTTTCCGGACCTTTTCATGGGGAAGCTCCTGATTTGCATGTCTATAGATTTTCTGACATTGAAGCAGCTACAGATAATTTTTCGTATGAAAATAAGCTTGGAGAGGGTGGTTATGGTCCCGTTTTCAAGGGCATCCTTCCTGATGGCCAGGAAATAGCAGTAAAAAAATTATCAACAGCTTCTACACAAGGATTTGAAGAATTCAAAAATGAGGATGAACAAGAAGCAAATACTAGCAAGATTGTGGGAACATATGGTTATGTTCCTCCTGAATATGTTAAGAAAGGTGTGTACTCTACTAAATCTGATGTCTATAGTTTTGGGGTCCTACTTCTACAAATTATAAGTGGCAAGAAGACTTCTTCCTTCTATGGAGAGAATGAAGATTTAAAGCTCCTGGAGTATGCTTATGAGTTATGGAAAGAAGGGAAGGATAACCCGTCTTGGGTGAAAGCTGGTTATTACTATTCTGGCAGTGAAATTTCTGCTTCAGACATAAAAGCCACGCTTTTCACTCACCTCTTATGTGCTTTTGCTTTTATAAACTCCACCACCTACAACATCTTTATCAACTCTTCAGAGGAGCACAAGTTCTCCACCTTCACCAACACTGTAAAGCTCCAAAACCCATCTGTTTCAACGCTTTTATCCATCTGGGGTGGCAGAGAGGACTCTTCACTGTTTAACTTAATGCTAAACCAATCTTCTTATAGGAAATCTTTCATTGATTCTTCGGTTAAAACAGCCAGGCTATATGGCTTTCAGGGCATAGACCTTTGTGGGGCCTGGCCAAGGCAGGGTAAGGACCTTGCAAATTTTGGAACCCTTTTGAAGGAATGGAGAGCTGCAATAACTTCTGAAGCAAGAAACTCCAGCAAGCCAGAGTTAGTGTTGGTGATGGCAGGTTACTACCTTAAAGCTTCAGACTCCTTCAGTTACCCCTTCAAATCAATGCAGATGAACTTGGATTGGGTGCATTTTGTGGCATATGATTACTATCTTCCAAGGAAAGACAATGTCACTGGTTTTCATGCTGCTTTATATGGTCCATCTGGTTGGGATAATACTGATTCTGGTATCGAAGAGTGGAGGAGAAGGGGATTTTCATCTAGAAAGCTGGTAATTGGCTTGCCTTATCATGGATATGCATGGACACTTGTGAACCCAGGAGATAACAGCGTGGGAAAACCAACATCAGGACCTGCCATTACAATGGACGGTTCCATGGCTTATAAGCTGATAAAGAGTTACATCAGAAGCTTTGGAGGGGGTGTTGTTTCACATTATAATGCTACTTTTGTGGTGAATCACTTCACAGTTGCATCCACCACTTGGGTTAATTTTGATGATGTGGAGGCAATAAGGGCTAAAGTTTCTTATGCAAAGGAAAATGGGCTACTTGGTTACAACGTATTCCAAGTGGGCAATGACGAAAATTGGGACCTTTCAAGGGCAGCTCAAGAAATAGATGAAGATCATCATAAGAGGAGGTTGCTGATAATTGTTCTGCTTACAACTCTTACTGTCGCACTTCTATTGGGAATATTATTTTGCTACTACCACCCAGATAACTTCTCAAAACAGAATAAGCTTGGAGAGGGTGGATTTGGATCTGTGTATAAGGGCAAATTACGGAAGGGACAGGAAATAGCTGTAAAAAGACTCTCAGAAACTTCAAATCAAGGCCTTGAAGAGTTCAAAAATGAGATCACGCTTACAGCAAGACTACAGCATGTGAATTTAGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTCTGATCTATGAATACCTGCCAAACAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAATTCTTGTAGACTGGAGCAAGCGTGTCAACATCATTGAAGGGGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATAATCCACCGAGATCTTAAAGCTAGTAATGTTTTGTTAGATCATGAGATGAATCCCAAGATATCAGATTTTGGTATGGCTAGAATTTTCAGGAAATATGACCTTGAAGCAAACACAAGCAGGATCGTAGGAACATATGGGTATGTACCACCTGAGTATGTGAGGAAAGGCATATACTCAACCAAGTACGACGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGTGGAAAAGGGACTTCATGTTATTATGGTACACATGAAAATATGAACCTTTTGGAATATGCATATGAGCTATGGAGGGAAGGTAGAGGTGTGGAGTTTATTGACCCATCATTGGATGATACAACATCACCTTGTAAAATCATGAGATGCATGCATGTGGCTCTGTTGTGTGTTCAAGAGAACTCTGCAGATAGGCCTTCCATGTTAGAAGTTGATTCACTGCTTAAGAATGAATATGCACCTATTGAAACTCCCAAAATGCCTGGTTTTTCAATGAAAAAACATGAAGATGAGAAAGAAACATCTCACTGCGGGATCAAACTTTCCTCAATCAATGATGTTACAATTTCTCAACTGGAACCAAGATGA 3804 0.3991 MLSRIALFLSFQIFICTLKFQSSEAQSWFKIGYWYYGSGFPISDINSALYTHLICAFADVNTSSFELSIPSSNAQPFSTFTTTVKLKNPSITTLLSIGGDQNNLAIQSMIKNASSRKPFIQSSIRIARLYGFQGLDLSWPTIETTSDAYNLGQLFQEWRAAAKSEAEKTNNSILQELILTAAVLGSPYLEIGSYPMESIRSNLNWVHVNAYDYHTPLGQNFTGAPSALYDPASDFNTDYNIKAWIGNGLAANKLILGLPFYGYVWKLQNPNNNAIGAPATGPADGEDGSRSYKDIKNNIQQNGGVVLYNDTYVTNYCSYGSNWIGFDDVKVVQKKVSYAREKQLLGYYVWQVSHDDDKWTLTSAAAAEQIGNHKKNRWKTLVIILSITATVIVILTIYYQRKRIFKSTGTVSAAKYSGSEWNKNVSGPFHGEAPDLHVYRFSDIEAATDNFSYENKLGEGGYGPVFKGILPDGQEIAVKKLSTASTQGFEEFKNEDEQEANTSKIVGTYGYVPPEYVKKGVYSTKSDVYSFGVLLLQIISGKKTSSFYGENEDLKLLEYAYELWKEGKDNPSWVKAGYYYSGSEISASDIKATLFTHLLCAFAFINSTTYNIFINSSEEHKFSTFTNTVKLQNPSVSTLLSIWGGREDSSLFNLMLNQSSYRKSFIDSSVKTARLYGFQGIDLCGAWPRQGKDLANFGTLLKEWRAAITSEARNSSKPELVLVMAGYYLKASDSFSYPFKSMQMNLDWVHFVAYDYYLPRKDNVTGFHAALYGPSGWDNTDSGIEEWRRRGFSSRKLVIGLPYHGYAWTLVNPGDNSVGKPTSGPAITMDGSMAYKLIKSYIRSFGGGVVSHYNATFVVNHFTVASTTWVNFDDVEAIRAKVSYAKENGLLGYNVFQVGNDENWDLSRAAQEIDEDHHKRRLLIIVLLTTLTVALLLGILFCYYHPDNFSKQNKLGEGGFGSVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDPRKSILVDWSKRVNIIEGVTQGLLYLQEYSNFTIIHRDLKASNVLLDHEMNPKISDFGMARIFRKYDLEANTSRIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKGTSCYYGTHENMNLLEYAYELWREGRGVEFIDPSLDDTTSPCKIMRCMHVALLCVQENSADRPSMLEVDSLLKNEYAPIETPKMPGFSMKKHEDEKETSHCGIKLSSINDVTISQLEPR 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi792g00023 1267 SMART 2g34 29 355 IPR011583 GO:0008061
Sebi792g00023 1267 SMART 2g34 573 901 IPR011583 GO:0008061
Sebi792g00023 1267 Gene3D Transferase(Phosphotransferase) domain 1 498 573 - -
Sebi792g00023 1267 Gene3D Transferase(Phosphotransferase) domain 1 1025 1229 - -
Sebi792g00023 1267 Gene3D Glycosidases 588 902 - -
Sebi792g00023 1267 SUPERFAMILY Chitinase insertion domain 805 872 IPR029070 -
Sebi792g00023 1267 Gene3D Phosphorylase Kinase; domain 1 945 1024 - -
Sebi792g00023 1267 Pfam Protein tyrosine and serine/threonine kinase 495 551 IPR001245 GO:0004672|GO:0006468
Sebi792g00023 1267 Pfam Protein tyrosine and serine/threonine kinase 951 1217 IPR001245 GO:0004672|GO:0006468
Sebi792g00023 1267 ProSitePatterns Protein kinases ATP-binding region signature. 955 977 IPR017441 GO:0005524
Sebi792g00023 1267 Pfam Glycosyl hydrolases family 18 578 901 IPR001223 GO:0005975
Sebi792g00023 1267 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 496 568 - -
Sebi792g00023 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1070 1082 IPR008271 GO:0004672|GO:0006468
Sebi792g00023 1267 Gene3D Transferase(Phosphotransferase) domain 1 433 497 - -
Sebi792g00023 1267 SUPERFAMILY (Trans)glycosidases 573 913 IPR017853 -
Sebi792g00023 1267 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 372 IPR001223 GO:0005975
Sebi792g00023 1267 CDD STKc_IRAK 955 1222 - -
Sebi792g00023 1267 SUPERFAMILY Protein kinase-like (PK-like) 435 545 IPR011009 -
Sebi792g00023 1267 Gene3D Glycosidases 42 356 - -
Sebi792g00023 1267 CDD GH18_plant_chitinase_class_V 26 361 - -
Sebi792g00023 1267 ProSiteProfiles Protein kinase domain profile. 949 1225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi792g00023 1267 SUPERFAMILY Protein kinase-like (PK-like) 942 1240 IPR011009 -
Sebi792g00023 1267 Pfam Glycosyl hydrolases family 18 31 355 IPR001223 GO:0005975
Sebi792g00023 1267 Gene3D - 260 326 IPR029070 -
Sebi792g00023 1267 Gene3D - 803 872 IPR029070 -
Sebi792g00023 1267 FunFam Chitotriosidase-1 260 326 - -
Sebi792g00023 1267 CDD GH18_plant_chitinase_class_V 571 907 - -
Sebi792g00023 1267 SUPERFAMILY Chitinase insertion domain 261 326 IPR029070 -
Sebi792g00023 1267 FunFam Uncharacterized protein 1025 1229 - -
Sebi792g00023 1267 SMART serkin_6 949 1225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi792g00023 1267 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 573 917 IPR001223 GO:0005975
Sebi792g00023 1267 SUPERFAMILY (Trans)glycosidases 31 367 IPR017853 -
Sebi792g00023 1267 FunFam Uncharacterized protein 941 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi792g00023 Sebi-Chr792 339002 349741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi792g00023 496 567 Receptor kinase-like Gene Family AT4G11530 54.795 1.17e-17 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi792g00023 Glyco_hydro_18 4.1e-55 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi792g00023 - - aprc:113847882 1180.24