Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi792g00014 ATGTCCATTAGAAAACCCCCATTCCCCCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCCAGCAAATTCTGCGTCATGTGAATATCTCTCTTCATGATGGAGCGGCGCTTGTGCTAACAGGTGCAAATGGCTCGGGAAAGACAACTTTCTTGCGCATGTTAGCTGGGTTTTCTCGTCCCTCTGCTGGTGAAATCCTATGGAATGGCCATAACATTCAAGAATCTGGAATTTTCCATCAGTATAAGCTTCAGCTTAACTGGGTCTCCCTCAAGGATGCTATTGCCGACAAGTTTACAGTTCTTGAAAATGTTCAATGGTTTGAACTTCTTGAAGGCAAGCAAGGGAAGGCTATGCCTGCACTTGAGTTAATGGGACTACGAAGATTGGCCAATGAAAAGCCAAGGATGTTGTCTATGGGCCAGCGGAAAAGACTGCAACTTGCCAGATGTCTAGCAATTGATCGCCCCATATGGTTGCTAGATGAGCCTTCAGTTGCATTAGATGATGAAGGTGTAAAGTTACTTGAGTTTATTATTGCAGAACACAGGAAACAGGGAGGAATTGTGATTGTAGCAACTCATTTACCCATTGAGATAGAAGACTCCATGATCTTAAGGCTGCCACCAAGGTTTCCAAGGAGGATGACTTTTGTGGATATGCTTGATCGGGCAGACATTAGTTAA 690 0.442 MSIRKPPFPRLLLNNVSCMRNAQQILRHVNISLHDGAALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQESGIFHQYKLQLNWVSLKDAIADKFTVLENVQWFELLEGKQGKAMPALELMGLRRLANEKPRMLSMGQRKRLQLARCLAIDRPIWLLDEPSVALDDEGVKLLEFIIAEHRKQGGIVIVATHLPIEIEDSMILRLPPRFPRRMTFVDMLDRADIS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi792g00014 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Sebi792g00014 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Sebi792g00014 229 Gene3D - 8 208 IPR027417 -
Sebi792g00014 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 202 IPR027417 -
Sebi792g00014 229 SMART AAA_5 35 223 IPR003593 GO:0016887
Sebi792g00014 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
Sebi792g00014 229 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 208 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi792g00014 Sebi-Chr792 200860 201549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi792g00014 24 207 Calmodulin-binding Proteins AT2G36910 25.373 1.08e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi792g00014 - - cpap:110815669 410.609