Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi78g00009 ATGGCCAAGCTCAGTGGTGTCAGAAACAGCAGCAAGAAGGGTGGGAGTGGCATTGTGAAGTTCAAGTTTGTGGTTGAGAAGCTTCACAAGAGGCTCTTACTTGGGAGAAATAAAGGAAGCAGTGACTTTGACAGATACGAACAAGTGCCAGAAGATGTGAAGGAAGGACACTTCGCTGTGATTGCTGAAGGTGGAGAGGAACCAAAGAGATTCGTTCTTCCACTAAGCTGTTTAACAAACCCAATGTTTTTGAGGCTTTTGGAGAGAGCAGCAGAAGAGTATGGGTTTGATCATGAAGGTGCACTAACCATTCCATGCAGGCCTTCTGAACTTGAGAGGATATTGGCACAGCAATGGCAGCAGCAACAAGAGGATCATCAAACTACTGCGTGTAATAAATCATCGTTTTTCCATAACTACTGA 423 0.4468 MAKLSGVRNSSKKGGSGIVKFKFVVEKLHKRLLLGRNKGSSDFDRYEQVPEDVKEGHFAVIAEGGEEPKRFVLPLSCLTNPMFLRLLERAAEEYGFDHEGALTIPCRPSELERILAQQWQQQQEDHQTTACNKSSFFHNY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi78g00009 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 114 IPR003676 GO:0009733
Sebi78g00009 140 Pfam Auxin responsive protein 37 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi78g00009 Sebi-Chr78 282529 282951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi78g00009 7 106 Calmodulin-binding Proteins AT3G43120 39.806 2.09e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi78g00009 K14488 - gmx:100794278 172.94