Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi785g00018 ATGTGGGTTTTAAAAGATCCCTCTGGGTGTTCGTTGCCACATGATGGTTACTTTATCGTACTTGCCTCTGTAGTCACAGTGCTAGCGAATAACCAGTGGTGGTACCCTACCTGTAAGTGCAACAGGGCTATGATTGTTGTTAGTGACAACTATTACTGTTCCATTTGCAAAACCAACATTGTTGAAGTCAGTCCTAGGTATAAGTTAAAGGTTGAGGTCTTTGATGGGGAAGACACAACTGCATTTGTTATGTTTGATAGTGACGCCGAGTTAGTTACTGGAATATCGTGCGATGGGGTGATTGATCATCTGCCAGCTGAGCTTGAAGAATTGGGCGGGAGGGAGTTCCTCTTCAAGGTCGAGAAAGCGGTAGATTTTGCCTTCAAGTATGATGACACTTTTAAGAACAAGTTTGCTGTCCAGTTCCCAAGTCTGGAGGACATCCCTGATGACACTACGAAGAACACTGTGGTCGACCCGGCTCCGAGCCAAGATAGTGACTATGAAGAATCTACTTTCTGCATTGCTAGTTTTTTGTCTAACGAGGCTGGATGTCCTGTTGGGGGTGGTAGTGGGGATGTAGAGAAGCCCATCTGCATAGGTGGTGTGAACCGACGTGGGAAGGGAAAGAAAGTTGGTTCCGGGTAG 648 0.463 MWVLKDPSGCSLPHDGYFIVLASVVTVLANNQWWYPTCKCNRAMIVVSDNYYCSICKTNIVEVSPRYKLKVEVFDGEDTTAFVMFDSDAELVTGISCDGVIDHLPAELEELGGREFLFKVEKAVDFAFKYDDTFKNKFAVQFPSLEDIPDDTTKNTVVDPAPSQDSDYEESTFCIASFLSNEAGCPVGGGSGDVEKPICIGGVNRRGKGKKVGSG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi785g00018 215 Gene3D - 6 142 IPR012340 -
Sebi785g00018 215 SUPERFAMILY Nucleic acid-binding proteins 14 140 IPR012340 -
Sebi785g00018 215 CDD RPA1_DBD_C 4 120 IPR047192 -
Sebi785g00018 215 Pfam Replication factor-A C terminal domain 18 100 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi785g00018 Sebi-Chr785 317478 318491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi785g00018 17 120 Core DNA Replication Machinery Family AT5G08020 26.087 2.64e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi785g00018 - - lja:Lj0g3v0266989.1 121.324