Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi785g00016 ATGATGAATTGGAGAGAACTTGGTTTGTTTATCTTTGCTTTATGTGCCTTGCCCTTGGTATGCTTTTGTGCTACCTTTGTTCCAGTAGATAATTACCTTATAGATTGTGGTGCTACTGCTACTACTTCAGTAGGTAACCGCAATTTCACAGCAGATAGTTTATCTAAGAAACTCCTTTCCACCCCACAAGATATTGTTGCCAGTACCTCTTCAAAATCAATTTCTTCTTCCTCTGATGAGTCCCCTCTATATCAAACAGCAAGAATCTTCAGTGGATCCTCAAAGTACACTTTTCCAATTAACCAAAAGGGGAGACACTGGATCCGTCTTTACTTCTTTCCTTTTACTTATGAAAAATACAATTTGAGTACTGCAAATTTCTCTGTTGTCACCCAAAGTCATGTCCTTCTCAGTAGCTTCAGTGTGCAGAAAAATCCTGTCATGAAGGAATACTCTTTGAATATCACTTCAGACACCCTTGTGCTCACCTTTACCCCTTCCACCAATTCCATTGCTTTTGTGAATGCCATTGAAGTTGTATCTGTCCCTAATGAACTCATTGCTGATGATGCTTTCAACTTAAATACATTAGCAACCTACTCTGGGTTGGTCACACAGGGTCTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCAACTGTCTCCTCTGGAGCTGACCCTCTTCATCGAACTTGGATTCCAGATCAACAGTTCCTTATAGAACCTAACCTTGCTGCTAATGTTTCGAAAATTGATGCTGTCAAGTATGTTGATGGTGGGGCAACAGAAAACATTGCTCCACCTTCTGTTTATGGTACTGTCACAGAGATGACAAACTCAAGTGATGATCCCCGTAATAATTTTAATGTGACATGGAAGTTTAATGTGGATCCTGGATTTCAGTACCTTGTTCGATTTCACTTCTGTGATATAGTCAGTAAAGGTCTCAATGAACTCTACTTCAATGTTTATATTGACTCCTCACTGGCTGCTAGGGATCTTGATCTTAGTTCTCAAAATAATAATGTTTTGGGTGTTCCATATTATAAGGATTTGGTTACGGGTTTGGCCGCAAGCAATCAACTTCGCGTAAGTATTGGCCCTTCTACTACAAATAATAACTACCCTAATGCCATTTTGAATGGGCTGGAGATCATGAAAATGAACAATTCTATGGGAAGTCTCAGCACAGGAGCAGCATCTGGGGTTATTGCTTCTGGTTCAAATTCTAATAAGGTTGGTATGATAGTGGGTGTGAGTCTTGGGATACTAGGTGCAGTGGTCTTGGCTGGAGTTTTCTGTGTACTATGCAGGAAAAGAAGAAGGTTGGCACGCCAAAGGCAGTCAAAGACATGGATTCCTTTATCCATCAACGATGGAACTTCCCATACAATGGGAAGTAAATATTCTAATGGAACAACAATAAGTGCTGCTTCAAACTTTGAGTATCGTGTCCCTTTTGCTGCAGTTCAGGAGGCTACAAACAATTTTGATGAGAATTGGGTTATTGGGGTTGGTGGTTTTGGGAAAGTATACAAGGGAGAATTAAGTGATGGCACAAAATTCCGCCATCGGCATCTGGTGTCTTTGATAGGGTATTGTGATGAAAAGAATGAGATGATATTGATATATGAATATATGGAGAAGGGAACCCTCAAGGGCCATCTGTATGGTTCTGATTTCCCGAGCTTAAGTTGGAAGGAGAGACTTGAGATATGCATTGGAGCTGCTAGAGGACTTCATTACCTTCACACTGGCTATTCTAAAGCAGTTATTCACCGTGATGTGAAGTCTGCCAATATCCTACTGGATGAGAACCTAATGGCTAAAGTTGCTGATTTTGGATTATCAAAGACAGGGCCTGAAATTGATCAGACACATGTGAGCACAGCTGTGAAAGGTAGTTTTGGGTACCTTGATCCAGAGTATTTCAGGAGGCAACAACTAACAGAAAAGTCAGATGTGTATTCCTTTGGGGTAGTTCTGTTTGAAGTTCTTTGTGCAAGACCTGTCATAGATCCATCCCTTCCTAGGGAAATGGTGAACCTGGCAGAATGGGCAATGAAATGGCAGAAAAAAGGACAGTTGGAGCAAATCATAGATTCATCGCTAGCAGGCAAAATCAGACCAGATTCTCTGAGGAAATTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTATGGTGTTGACAGACCTTCCATGGGAGATGTCTTATGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCCACTGTTCAAGGTGATCCTGAAGAAAACAGTACCAACATGATTGGTGAACTCTCACCACAGGTCAACAATTTCAGCCATGATGCAAGTGCATCTGCTGTACAATTTGAAGCTTCAAATGTGGATGATCTGTCTGGTGTTTCTATGAGTAGAGTATTCTCGCAGTTGGTGAAGTCTGAGGCAGCTCTCTGCCCCGACTTAGAAGATTAA 2457 0.4143 MMNWRELGLFIFALCALPLVCFCATFVPVDNYLIDCGATATTSVGNRNFTADSLSKKLLSTPQDIVASTSSKSISSSSDESPLYQTARIFSGSSKYTFPINQKGRHWIRLYFFPFTYEKYNLSTANFSVVTQSHVLLSSFSVQKNPVMKEYSLNITSDTLVLTFTPSTNSIAFVNAIEVVSVPNELIADDAFNLNTLATYSGLVTQGLETVWRVNMGGPTVSSGADPLHRTWIPDQQFLIEPNLAANVSKIDAVKYVDGGATENIAPPSVYGTVTEMTNSSDDPRNNFNVTWKFNVDPGFQYLVRFHFCDIVSKGLNELYFNVYIDSSLAARDLDLSSQNNNVLGVPYYKDLVTGLAASNQLRVSIGPSTTNNNYPNAILNGLEIMKMNNSMGSLSTGAASGVIASGSNSNKVGMIVGVSLGILGAVVLAGVFCVLCRKRRRLARQRQSKTWIPLSINDGTSHTMGSKYSNGTTISAASNFEYRVPFAAVQEATNNFDENWVIGVGGFGKVYKGELSDGTKFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKGHLYGSDFPSLSWKERLEICIGAARGLHYLHTGYSKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDSSLAGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEATVQGDPEENSTNMIGELSPQVNNFSHDASASAVQFEASNVDDLSGVSMSRVFSQLVKSEAALCPDLED 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi785g00016 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Sebi785g00016 818 Gene3D Transferase(Phosphotransferase) domain 1 548 766 - -
Sebi785g00016 818 Gene3D Phosphorylase Kinase; domain 1 521 547 - -
Sebi785g00016 818 SMART serkin_6 497 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi785g00016 818 Pfam Protein tyrosine and serine/threonine kinase 520 670 IPR001245 GO:0004672|GO:0006468
Sebi785g00016 818 Gene3D Phosphorylase Kinase; domain 1 459 520 - -
Sebi785g00016 818 SUPERFAMILY Protein kinase-like (PK-like) 474 742 IPR011009 -
Sebi785g00016 818 PANTHER OS03G0124300 PROTEIN-RELATED 12 452 IPR046957 GO:0004672
Sebi785g00016 818 FunFam Putative receptor-like protein kinase 31 183 - -
Sebi785g00016 818 FunFam Receptor-like protein kinase FERONIA 547 762 - -
Sebi785g00016 818 ProSiteProfiles Protein kinase domain profile. 413 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi785g00016 818 Pfam Malectin-like domain 34 388 IPR024788 -
Sebi785g00016 818 FunFam Receptor-like protein kinase FERONIA 207 390 - -
Sebi785g00016 818 Gene3D - 207 390 - -
Sebi785g00016 818 Gene3D - 31 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi785g00016 Sebi-Chr785 235875 238495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi785g00016 2 810 Receptor kinase-like Gene Family AT3G46290 63.420 0.0 1046
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi785g00016 Malectin_like 4.6e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi785g00016 - - gmx:100305416 1271.53