Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi784g00013 ATGTCTGGAAATGTGCTTTTAAATGGAAAGAAAAGGAGATTAGACTATGGAGTTGTGGCTTATGTGACCCAAGAAGACATATTGTTGGGAACACTATCAGTGAGAGAGACAATATCTTACTCAGCAAATCTAAGGCTTCCAGCTACCATGACAAAAGAAGAAATTAATGACATTGTAGAGGGAACAATTATGGAGATGGGTCTTCAAGATTGTGCTGATCGGCTAATAGGGAACTGGCACTTGAGAGGCATAAGTGGTGGAGAAAAGAAAAGACTAAGTATAGCACTTGAAATCCTCACAAGGCCTTGCCTATTGTTCCTTGATGAACCCACAAGTGGTCTAGATAGTGCCTCAGCATATTTTGTTGCCCAAACTTTGAGAAACATAGCTCATGATGGAAAGACTGTTATATCTTCAATACATCAACCAAGTAGTGAGGTTTTTGCACTCTTTGATGATCTCTTTCTGCTTTCTGGGGGTCAAACTATATATTTTGGAGCAGCTGAAAAGGCAGTTGAGTTCTTTGCCAAAGCAGGATTCCCATGTCCAAGTAGAAGAAATCCTTCTGATCATTTCCTCCGTTGCATTAATTCAGACTTCGACACTGTTACCACCACTATGATGGCCTCTCGGAGAATACATGAACAAAAATCATTAGCACCACCGTTAGTGGACATATCAACTGCAGCAATCAAAGCAATACTCATAGAGAAATACCGATGGTCAGAATATGCAACTACTGCAAGAGCAAGAATCAAAGAAATCTCTAACATTGAAGTAGATGATTCTGATGAAAGTAAAAGCAAGAGCCAAGCCAAATGGTGGAAGCAACTATCAACACTAACCCATAGATCATTCCTGAACATGTCTAGAGATGTGGGGTACTACTGGATAAGGATAACAATCTATGTGGCCTTATCTTTGTGTGTGGGAACAATCTTTTATGAAGTTGGATCAAGTTATAGGGCAATCTTTGCAAGAGGAGCATGTGGCGCTTTTATATCAGGTTTCATGACATTCATGTCCATAGGAGGCTTCCCATCCTTCATAGAAGAAATGAAGGTCTTTTACAAAGAAAGGCTCAATGGGTATTATGGAATTGCAGTCTACATTCTATCAAATTTTCTCTCTTCCTTTCCCTTTGTGGCAATGATGTCCATTTCTACTGGGACTATAACCTATTATATGGTTAAGTTTGGTCCTGAGTTTTCACATTTCTTGTATATCTGCTTGGATCTTATCACCTGCATTGCGGTTGTGGAGAGTTCCATGATGATTATAGCTGCACTGGTTCCCAACTTCCTCATGGGATTGATAATTGGAGCAGGATATATTGGTGTTATGATGATGACTTCTGGCTTTTTCCGTCAGATCCCTGATCTTCCCAAATTCTTCTGGCGTTACCCAATTTCATACATCAATTATGGTGCATGGGCATTGCAGGGAGCATACAAGAATGACATGATTGGGATGGAGTTTGATCCTTTAGTACCTGGGGGCCCAAAACTGAAAGGAGAAACCATCCTCACAAGCATGCTTGGAATGCGAATTGATTATTCAAAATGGTGGGACTTAGCTGTAGTCACGGTCATCCTCATCTTGCTCAGAGTTCTTTTCTTTCTGGTTCTCAAATTCAAGGAGAGAGCTACACCTTTCATTCATAGTATCTATGCCAAGCAAACTCTGCAACGTATCAAGAAGCGACCTTCGTTCAGGAAAGCACCATCTTTCCCTTCCAAGAGGCACCAATCACTGCATCCATTGTCTTTTCAAGAGGGTCTCAACTCCCCAGTAAACTAG 1800 0.4083 MSGNVLLNGKKRRLDYGVVAYVTQEDILLGTLSVRETISYSANLRLPATMTKEEINDIVEGTIMEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGAAEKAVEFFAKAGFPCPSRRNPSDHFLRCINSDFDTVTTTMMASRRIHEQKSLAPPLVDISTAAIKAILIEKYRWSEYATTARARIKEISNIEVDDSDESKSKSQAKWWKQLSTLTHRSFLNMSRDVGYYWIRITIYVALSLCVGTIFYEVGSSYRAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGIAVYILSNFLSSFPFVAMMSISTGTITYYMVKFGPEFSHFLYICLDLITCIAVVESSMMIIAALVPNFLMGLIIGAGYIGVMMMTSGFFRQIPDLPKFFWRYPISYINYGAWALQGAYKNDMIGMEFDPLVPGGPKLKGETILTSMLGMRIDYSKWWDLAVVTVILILLRVLFFLVLKFKERATPFIHSIYAKQTLQRIKKRPSFRKAPSFPSKRHQSLHPLSFQEGLNSPVN 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi784g00013 599 Gene3D - 1 178 IPR027417 -
Sebi784g00013 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 177 IPR027417 -
Sebi784g00013 599 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 568 - -
Sebi784g00013 599 Pfam ABC transporter 15 112 IPR003439 GO:0005524
Sebi784g00013 599 Pfam ABC-2 type transporter 277 486 IPR013525 GO:0016020|GO:0140359
Sebi784g00013 599 Pfam ABC-2 type transporter 141 204 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi784g00013 Sebi-Chr784 357298 360964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi784g00013 2 155 Calmodulin-binding Proteins AT2G36910 31.609 5.15e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi784g00013 K05681 - gmx:100806806 1019.99