Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi782g00010 ATGTTAAGCTTCACCGACTCTGTTGCACTGAAATGTGTTGTCGAGCTGCGCATAGCTGACATAATAGACCGTTATGGTAAACCACTGTCCTTGTCCCAAATTGCAGCAAACATTGAAGATGCACCCACTCCTGAACTTGCCCTGCTACAAAGAGTCATGAGAGTAATGGTGCGCAGAAAGATCTTCAGTTCAGAGAAGTCAGAGAGCGGAGAGACTCTTTATGGCATGACACGTGCTTCCAAATGGATCTTAAGGGACACCAAAATGACCTTGGCACCCATGTTGTTGCTAGAGAACCACCCAATCCATTTGAACCCTGCTCACTACATTAGTGACTGTGTCAGAGAAGGTTACAAAAATGGAACTCCTTTCTTTAGGTGCCATGGTCATGATCAATTTGAAATGACTGGGTTGGACGCAGATTATAACAGGTTATTCAACGAGGGAGGTGGCATTGGAGGTTCACTCTCTGAGATTGTGAGAGCCTACCCACACATCAAAGGCATTAACTTTGACTTGCCTCATGTCGTTGCCACTGCACCCAAGTACGATGGAATCACCCATGTTGGAGGTGACATGTTCGTATCCATTCCTAATGCTGATGCTATTTACATGAAGTGGATTCTGCATGACTGGAGTGATGAACATTGCATCAAGATTTTAAAGAACTGCAGGAAGGCAATACCAGAGAAGACAGGAAAGGTGATCATTGTGGATCATGTTCTGGATCCAGAAGGGAATGAACCATTTACTGACACTGGTATTGCGTTTGATATGATGTTGCTTGCACACAACTCTGGTGGGAAAGAAAGGACTGAGGAGAATTGGAAATACCTATTCAAAGAAACAGGATTTGCTCGTTATAACATCATCAAGATCAATGCTTTGCCATCCATCATTGAGGCATTTCCAATCTAA 918 0.4368 MLSFTDSVALKCVVELRIADIIDRYGKPLSLSQIAANIEDAPTPELALLQRVMRVMVRRKIFSSEKSESGETLYGMTRASKWILRDTKMTLAPMLLLENHPIHLNPAHYISDCVREGYKNGTPFFRCHGHDQFEMTGLDADYNRLFNEGGGIGGSLSEIVRAYPHIKGINFDLPHVVATAPKYDGITHVGGDMFVSIPNADAIYMKWILHDWSDEHCIKILKNCRKAIPEKTGKVIIVDHVLDPEGNEPFTDTGIAFDMMLLAHNSGGKERTEENWKYLFKETGFARYNIIKINALPSIIEAFPI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi782g00010 305 Pfam Dimerisation domain 9 57 IPR012967 GO:0046983
Sebi782g00010 305 PIRSF O-mtase 1 149 IPR016461 GO:0008168
Sebi782g00010 305 PIRSF O-mtase 148 305 IPR016461 GO:0008168
Sebi782g00010 305 Pfam O-methyltransferase domain 145 286 IPR001077 GO:0008171
Sebi782g00010 305 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 302 IPR029063 -
Sebi782g00010 305 Gene3D - 1 83 IPR036388 -
Sebi782g00010 305 SUPERFAMILY "Winged helix" DNA-binding domain 2 86 IPR036390 -
Sebi782g00010 305 Gene3D Vaccinia Virus protein VP39 85 305 IPR029063 -
Sebi782g00010 305 PANTHER O-METHYLTRANSFERASE 7 149 IPR016461 GO:0008168
Sebi782g00010 305 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 141 304 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi782g00010 Sebi-Chr782 193711 194820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi782g00010 8 291 Monolignol Biosynthesis Gene Families AT5G54160 36.250 2.64e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi782g00010 K22588 - gmx:100800801 535.413