Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi782g00009 ATGCCTTTTCGCCCAGTTGGTGGGAACATGTTTGTTTTTGAAGAAAATGAAGGGGAGGATGACCAACATCCTAGTGCCCCCTCATCTACAGGGAACCTCTCAGAAGTTGAAATTATGGACCATGAAGATATATCAGTGGACGAAATCTCCCACGTGGACATGGGACCTAATGTGAACAAGGGTCACAATTACATAAAGGACATGACTCGTCACTTCAAGCCTATGATATGCATCCTAGTTGAAACTTATTATCCCTTTCACTCTGCTGAGAAGTTCTGGCATTCATTAGAGGCATTTGTAGAGGTGTTATGCAAGGTTCAATCTGATCATGCTCCCATTATCCTCCATTGTGGGGATGAGCCTGTTTCAAAACGAGGTAGACCTTTCAGGAAAAGACGAATTGAATCTAGACTCTATGGGGTTTATAATGATCTTGATTTTGGTCCCACTGCACAGATGATTAAAAAGGAAAGGGAGCTTCAAAAGGAAATCTTTGGTTTCCAGAATCTGTATGCGTCAGAAACTTCTTCTGGAGTGGTCTCTCACATAAAAGGGGCTGGAATCTCATCAGATGGCATCAGAGGTCCGGATATGAAATGCCTCGGTGATTTTTCTGGTTTTGCTGGTATTGGTAGCGCTATGGAAGCGGAGTTTCTGGCTGTTTTGTTCGCTCTCCAGTTTGCTTGGGCTAGAGTTTTGTTTAGTCTCTGTTCTCACGTTGCAACCTCTCGATCAAGGATTGAAGTGCTCCCTGGCTTTCAAGGGCCCCTTCCCTTCGAGCTTGAAACAGGGTACGTGGGATTAGGAGAAACAGGGGATGATCTGCAGGTGTTCTACTACTTTATTAAGTCAGAGAACAATCCTGAAAAAGACCCTCTCATGCTTTGGTTAAGTGGTGGTCCTGGATGCTCTTCATTTTCGGGTCTCGTCTATCAAATTGGTCCAATTGCATTTGAAATTAAGGATTACAACTGGAGCTTGCCTAATTTGGTCTTGAGGCAACAATCATGGACAAAGGTATCTAGTATTATTTTCGTAGATTTGCCATTTGGAACTGGCTTCTCTTATGCGAAAAATGTCCGTGCGCAACGAGGAGACTGGAAATTAGTTCACCATACTCACCAATTTCTCAGGAAGTGGCTGGTTGATCATTCAGAATTTCTTTCAAACAAATTGTTCATTGGAGGTGATTCATACACTGGCATTCCTCTACCCGCCATTGGTGTCGAAATCTCTAATGGAAATGAAAAAGGTCTCAAACCGTGGATAAATCTCCAGGGATATCTGCTAGGGAACCCTATAACAACTAGAAGAGAAAAAAATGAGCAAATTCCATTTGCCCATGGAATGGGACTTATCTCTGATGAACACTATGCGACTTTTGCTGATTTTGTCTGCGCTAAATGGATGAATGATGAGAGTGTTCGAAAAGCATTGCATGTTCGAGAGGGAACAACAGGGCAGTGGGAACGTTGTTACAAAGTTGATTATGACTTTGAAATCTTTAGCAGTTTCGAGTTTCATGTACATCTTAGTGCTAAAGGCTACCCTTCCTTGATATATAGTGGGGATCATGACTTACTTGCTCCTTTCTTGTCGACGCAAGCATGGATAAGGGCTCTAAACTACTCCATTGTGCATGATTGGAGGTCATGGCATGTTAATAACCAAGTTGCAGGATACACAAGGACTTACTCAAATCAAATGACATTTGCAACTGTGAAGGGTGCAGGACATATAGCTTCTAAGTACAAGAGTGATGAATGTTTAGCCATGTTCACTAGATGGATATCTAATGAGCCTTTGTGA 1809 0.424 MPFRPVGGNMFVFEENEGEDDQHPSAPSSTGNLSEVEIMDHEDISVDEISHVDMGPNVNKGHNYIKDMTRHFKPMICILVETYYPFHSAEKFWHSLEAFVEVLCKVQSDHAPIILHCGDEPVSKRGRPFRKRRIESRLYGVYNDLDFGPTAQMIKKERELQKEIFGFQNLYASETSSGVVSHIKGAGISSDGIRGPDMKCLGDFSGFAGIGSAMEAEFLAVLFALQFAWARVLFSLCSHVATSRSRIEVLPGFQGPLPFELETGYVGLGETGDDLQVFYYFIKSENNPEKDPLMLWLSGGPGCSSFSGLVYQIGPIAFEIKDYNWSLPNLVLRQQSWTKVSSIIFVDLPFGTGFSYAKNVRAQRGDWKLVHHTHQFLRKWLVDHSEFLSNKLFIGGDSYTGIPLPAIGVEISNGNEKGLKPWINLQGYLLGNPITTRREKNEQIPFAHGMGLISDEHYATFADFVCAKWMNDESVRKALHVREGTTGQWERCYKVDYDFEIFSSFEFHVHLSAKGYPSLIYSGDHDLLAPFLSTQAWIRALNYSIVHDWRSWHVNNQVAGYTRTYSNQMTFATVKGAGHIASKYKSDECLAMFTRWISNEPL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi782g00009 602 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 467 585 IPR001563 GO:0004185|GO:0006508
Sebi782g00009 602 Pfam Serine carboxypeptidase 251 465 IPR001563 GO:0004185|GO:0006508
Sebi782g00009 602 Pfam Serine carboxypeptidase 466 599 IPR001563 GO:0004185|GO:0006508
Sebi782g00009 602 Gene3D alpha/beta hydrolase 240 465 IPR029058 -
Sebi782g00009 602 FunFam Serine carboxypeptidase-like 19 240 485 - -
Sebi782g00009 602 SUPERFAMILY alpha/beta-Hydrolases 249 601 IPR029058 -
Sebi782g00009 602 PRINTS Carboxypeptidase C serine protease (S10) family signature 346 356 IPR001563 GO:0004185|GO:0006508
Sebi782g00009 602 PRINTS Carboxypeptidase C serine protease (S10) family signature 380 405 IPR001563 GO:0004185|GO:0006508
Sebi782g00009 602 PRINTS Carboxypeptidase C serine protease (S10) family signature 333 345 IPR001563 GO:0004185|GO:0006508
Sebi782g00009 602 PRINTS Carboxypeptidase C serine protease (S10) family signature 569 582 IPR001563 GO:0004185|GO:0006508
Sebi782g00009 602 Gene3D alpha/beta hydrolase 466 602 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi782g00009 Sebi-Chr782 159387 174205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi782g00009 465 602 Calmodulin-binding Proteins AT2G22960 56.115 1.02e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi782g00009 K16296 - gmx:100801015 496.893