Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi782g00004 ATGGACACATCAAAGAAAAGTGGAAAATCCACCAAGGAGAGTGTTGATGACACTTCAAAGGTTACAGGTGGAAGTGAAAGTCAAGATTGGGAGATGGAGAAGGGAAAGGGTCTTGATTTCAGCTCAGGGAGGCGCCAATGGAAGCCAGTTTTTGATGACATTTCCATGTCAGATAGACCTCTCAAGAAGATTCGTAGTCCTGAACGCCAAAACCCAAATCAACCATCCTCTGTATTATCTCTGCAACCCCCTTCATCTAAAATACTCTTTCCTTTTGCTTTTGAAGCCTCTCAATCTCAACATTCAATGCCATTCCCACACCAACCTGCAACCACAAATTTGCCTCCTTTTCATCCACCTCTTCAGCCAACACAACAAATCCAGCACATGATATCTTTTGGGCCCCAGCAGAACATGGGTGATGCACTGAATCTAAGTCCAAGAGGAAGGGTGTTAGGACCAGAAGGAAGACCAATGTTAAGGCCCCAAACACAGCCTTTGAATGCTACAAAGCTCTATAGGGGAGTGAGACAGCGCCATTGGGGCAAATGGGTTGCTGAGATTCGTCTTCCTCGCAATAGGACTCGTCTCTGGCTAGGCACATTTGATACTGCTGAAGATGCTGCTATGGCATATGATCGTGAGGCTTTTAAGCTGAGAGGAGAGAATGCTAAGCTCAATTTCCCTGAGCTTTTCCTTAACAAGGATAATGCAGCAGCATCCACAACAGCTCAAACTTCTTCTTCCCCACATGAAGGTTCAACATCAACATCAAGCCAGAACACAAAGCAACCTGAAGTTGAACTTGAACCAGTTCAAGAAGACCATAACAACAACATGCAGGCTCTCAATGATGAAAGCATGCAGCCACTAGCATCAATAACAGAAGAGAATGCTGAAACTGGGGAAGGCATTTCACAGTCTCAGGAATTGGTTTGGGGAGAAATGGCTGCTTGGTTCAATGCAATTCCTGCAGGTTGGGGACCAGGTAGCCCTATGTGGGATGATTTGGACCACAACAATAATCTTCTTTTGCAGTCACAGTTTCCTTTTCTGAATCCAAATCAGCAAGAATTTCATGATGGTAATGCTGCTCAGAGACAAGAAGAAGATAACACAGGACCAGGTTCTTCCTCTTCCACTTGTCCCACCAGGCCTTTCTTCTGGAAGGGTCAAGATTGA 1182 0.4509 MDTSKKSGKSTKESVDDTSKVTGGSESQDWEMEKGKGLDFSSGRRQWKPVFDDISMSDRPLKKIRSPERQNPNQPSSVLSLQPPSSKILFPFAFEASQSQHSMPFPHQPATTNLPPFHPPLQPTQQIQHMISFGPQQNMGDALNLSPRGRVLGPEGRPMLRPQTQPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNKDNAAASTTAQTSSSPHEGSTSTSSQNTKQPEVELEPVQEDHNNNMQALNDESMQPLASITEENAETGEGISQSQELVWGEMAAWFNAIPAGWGPGSPMWDDLDHNNNLLLQSQFPFLNPNQQEFHDGNAAQRQEEDNTGPGSSSSTCPTRPFFWKGQD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi782g00004 393 MobiDBLite consensus disorder prediction 51 66 - -
Sebi782g00004 393 ProSiteProfiles AP2/ERF domain profile. 172 229 IPR001471 GO:0003700|GO:0006355
Sebi782g00004 393 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Sebi782g00004 393 PRINTS Ethylene responsive element binding protein signature 195 211 IPR001471 GO:0003700|GO:0006355
Sebi782g00004 393 Pfam AP2 domain 173 221 IPR001471 GO:0003700|GO:0006355
Sebi782g00004 393 SUPERFAMILY DNA-binding domain 172 230 IPR016177 GO:0003677
Sebi782g00004 393 CDD AP2 171 231 IPR001471 GO:0003700|GO:0006355
Sebi782g00004 393 MobiDBLite consensus disorder prediction 239 271 - -
Sebi782g00004 393 SMART rav1_2 172 235 IPR001471 GO:0003700|GO:0006355
Sebi782g00004 393 MobiDBLite consensus disorder prediction 1 83 - -
Sebi782g00004 393 MobiDBLite consensus disorder prediction 353 387 - -
Sebi782g00004 393 MobiDBLite consensus disorder prediction 67 83 - -
Sebi782g00004 393 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 20 337 - -
Sebi782g00004 393 MobiDBLite consensus disorder prediction 27 41 - -
Sebi782g00004 393 MobiDBLite consensus disorder prediction 239 267 - -
Sebi782g00004 393 MobiDBLite consensus disorder prediction 1 16 - -
Sebi782g00004 393 FunFam Ethylene-responsive transcription factor 2 171 230 - -
Sebi782g00004 393 Gene3D AP2/ERF domain 172 230 IPR036955 GO:0003700|GO:0006355
Sebi782g00004 393 MobiDBLite consensus disorder prediction 353 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi782g00004 Sebi-Chr782 65628 66911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi782g00004 1 343 AP2-EREBP Transcription Factor Family AT2G20880 40.838 3.00e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi782g00004 AP2 2.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi782g00004 - - gmx:100811328 503.056