Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi780g00015 ATGAAGTTTAAGGCACACAAATTAAGCATTCAGGGTATTGCCTGGTCTTTTGGTGGTATGATCTTTGCCCTTGTGTACTGCACTGCTGGAATTTCAGGTGGACACATCAACCCAGCTGTGACCTTTGGTCTCTTTTTGGCAAGGAAGCTCTCCCTCACAAGAGCTCTATTCTACATTATCATGCAATGTCTTGGAGCAATCTGTGGTGCTGGTGTGGTGAAGGGCTTTGAGGGTAATGCTAGATATGAGTTGTTCAAAGGTGGAGCAAATTTTGTAAATCCTGGATACACCAAGGGTGATGGCCTTGGAGTTGAGATTGTTGGCACCTTTGTTCTTGTCTACACCATTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGGGACTCTCATGTTCCTAGACTCCATCCATTCATCTTTCTCCCTTGCACGGTTCTTGTTCCCATTGATCTGGTTCCTCACCAGGGAAGCCGTGTAATTATCATTCGACACAACACCCTTCACCGAAGAATTAGAACTCAAGCTCTGGTGAGGGGTGGTGATTTCACCTCCAAGCTTGAAGCTTTAGAGCTTGTGTTGGAGATTAAGGTCTGGTTTGTGCTTGGAGGAAAAGGGACTGCATCTTGA 624 0.4583 MKFKAHKLSIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAICGAGVVKGFEGNARYELFKGGANFVNPGYTKGDGLGVEIVGTFVLVYTIFSATDAKRNARDSHVPRLHPFIFLPCTVLVPIDLVPHQGSRVIIIRHNTLHRRIRTQALVRGGDFTSKLEALELVLEIKVWFVLGGKGTAS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi780g00015 207 Pfam Major intrinsic protein 8 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi780g00015 207 ProSitePatterns MIP family signature. 35 43 IPR022357 -
Sebi780g00015 207 SUPERFAMILY Aquaporin-like 4 134 IPR023271 -
Sebi780g00015 207 Gene3D Glycerol uptake facilitator protein. 1 155 IPR023271 -
Sebi780g00015 207 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 155 IPR034294 -
Sebi780g00015 207 PRINTS Major intrinsic protein family signature 17 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi780g00015 207 PRINTS Major intrinsic protein family signature 104 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi780g00015 207 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi780g00015 Sebi-Chr780 356606 357878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi780g00015 7 158 Major Intrinsic Protein MIP AT1G01620 72.368 2.04e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi780g00015 K09872 - gmx:100793242 252.292