Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi780g00005 ATGCTTGGAGGTGCAGGGTTTTTGTGGATGGGTTGGACAGGTTTTAATGGTGGAGCTCCATTCCAAGTGGGAGAAATCGCGTCCTTGGCCATCTTCAACACCCATCTATGCACTGCCACAAGCCTACTTGTTTGGCTTTCCCTGGATATGATTGTATATAGGAAGAGCTCAGTGATAGGTGCTGTCCAAGGAATGATGACTGGCCTTGTTTGCATCACCCCAGGTGCAGGCTTGGTTGATTCATGGGCAACAATATTGATGGGAGCTTTATCCGGTTCAATTCCATGGTACACCATGATGGTGTTGCACAAGAGATCAGTGTTCTTTCAGAGTGTGGATGATACATTAGGAGTCTTTCACACTCATGCTGTGGCTGGTATTCTTGGGGGACTCCTTTCTGGTGTGTTTGCCAAACCCAACCTTTTAAAGATGATCTATGGTCATGGAATGACATATGGTCCTGGCTTATTCTATAGCTATTTTGAGGGGAATTTGGGACAAGGTTTAAAGCAACTATGCTACCAGTTATTAGGAGCAACTTTTATTACTCTTTGGAATGTCATTGTTACTAGCCTCATCTGTATTCTTATAAGGCGCATTGTGGATCTTAGGATGCAAGAAGAGGACCTTGAGGTTGGTGATGATGCTGCTCATGGGGAAGAAGCTTATGCATTGTGGGGTGATGGGGAAAGAATGCGAGTCGCTCTTCGTCTTCATATAAGTCCAACAATTCCTTCCATTTGTCGGCAGAGGTTTTTGATTCCTGTCAATAGGAAAGAAATGGAATAA 789 0.4423 MLGGAGFLWMGWTGFNGGAPFQVGEIASLAIFNTHLCTATSLLVWLSLDMIVYRKSSVIGAVQGMMTGLVCITPGAGLVDSWATILMGALSGSIPWYTMMVLHKRSVFFQSVDDTLGVFHTHAVAGILGGLLSGVFAKPNLLKMIYGHGMTYGPGLFYSYFEGNLGQGLKQLCYQLLGATFITLWNVIVTSLICILIRRIVDLRMQEEDLEVGDDAAHGEEAYALWGDGERMRVALRLHISPTIPSICRQRFLIPVNRKEME 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi780g00005 262 Gene3D Ammonium transporter AmtB like domains 1 226 IPR029020 -
Sebi780g00005 262 Pfam Ammonium Transporter Family 4 223 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sebi780g00005 262 PANTHER AMMONIUM TRANSPORTER MEP2 1 232 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sebi780g00005 262 SUPERFAMILY Ammonium transporter 4 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi780g00005 Sebi-Chr780 107413 108787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi780g00005 9 232 Inorganic Solute Cotransporters AT2G38290 55.804 2.19e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi780g00005 K03320 - gmx:100815876 447.588