Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi780g00004 ATGAATTTTAATTCATCTACTTCCCATCTACCAGAATCACTTTTACCAAGCGAAGCATCACCCGAATGGAACAACAAAGCAGATAATGCATGGCAACTCACAGCAGCAACACTAGTGGGCCTTCAAAGTGTTCCTGGGCTTGTGATACTCTACGGTAGCATGGTTAAGAGGAAATGGGCCGTGAATTCTGCCTTTATGGCGCTATATGCTTTCGCTGCTGTCCTCATTTGTTGGGTTTTATGGGCCCATCGCATGGCATTTGGCACTAAGCTTATGCCATTTGTTGGAAAGCCCAACAATGCTCTGACGGAGAAGTTTCTCCTTGCCCAGTCATCAACACATGATTATTTTCCAATGGCTGACTTTGTGTTCTATCAATTTGCTTTTGCTGCAATTACTGTTGTGTTGCTTGCAGGGTCTTTGCTTGGGAGAATGAATTTCTATGCATGGATGATGTTTGTTCCTATGTGGCTTACACTGTCTTACACCATTGGTGCTTTCAGCATATGGGGCAATGGCTTCCTTGAACAAAAAATAATTGATTATGCTGGTGGCTTTGTCATTCATCTATCTTCAGGTGTCGCAGGAAACAAAGTGCCTATAGCATTGCCAAAGTGGGTTGGCACAAATGGTCAAGGACTCGGATAA 648 0.4352 MNFNSSTSHLPESLLPSEASPEWNNKADNAWQLTAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALYAFAAVLICWVLWAHRMAFGTKLMPFVGKPNNALTEKFLLAQSSTHDYFPMADFVFYQFAFAAITVVLLAGSLLGRMNFYAWMMFVPMWLTLSYTIGAFSIWGNGFLEQKIIDYAGGFVIHLSSGVAGNKVPIALPKWVGTNGQGLG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi780g00004 215 Gene3D Ammonium transporter AmtB like domains 10 213 IPR029020 -
Sebi780g00004 215 MobiDBLite consensus disorder prediction 1 20 - -
Sebi780g00004 215 PANTHER AMMONIUM TRANSPORTER MEP2 13 204 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sebi780g00004 215 Pfam Ammonium Transporter Family 30 197 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sebi780g00004 215 SUPERFAMILY Ammonium transporter 23 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi780g00004 Sebi-Chr780 100813 101886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi780g00004 119 196 Inorganic Solute Cotransporters AT2G38290 69.620 3.59e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi780g00004 K03320 - gmx:100815876 338.961