Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi780g00002 ATGGGCGCATCCAACAAATGGTGGAGAATAGTTCGTAGCAAGTTCCTAAGATCATCCAACAGTAAATTAGGCATAACAATCCCCCCTCGTACGAGTGTTTGCACAAATCAAAGCGAAGAAGCCATACTCAATCAGAATGAAGCAACCACAACCACAACCTCCACGACGGAAGACTTCAATTTGGCAATACCAAATTCTTCGACGAGGATATTATCCAAGGAAGACATTGCGGCAATTAAGATCCAAGCTTATTTCAGGGGTCACCTTGCAAGACGAGCATATAGGGCTCTGAAGAGCCTAGTGAAGTTGCAAGCATTGGTTCGTGGGGTGTGTGTAAGGAGACAATCACGTATAGCGATGCAGTGTATGCACGCGCTTGTTCGCTTACAAGTCAGGATTCGTGCAAGACAATTACTTGGTTCTACTAGTTTTGATAATTAA 441 0.4399 MGASNKWWRIVRSKFLRSSNSKLGITIPPRTSVCTNQSEEAILNQNEATTTTTSTTEDFNLAIPNSSTRILSKEDIAAIKIQAYFRGHLARRAYRALKSLVKLQALVRGVCVRRQSRIAMQCMHALVRLQVRIRARQLLGSTSFDN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi780g00002 146 PANTHER IQ-DOMAIN 5-RELATED 14 137 - -
Sebi780g00002 146 Pfam IQ calmodulin-binding motif 77 95 IPR000048 GO:0005515
Sebi780g00002 146 Gene3D - 72 125 - -
Sebi780g00002 146 ProSiteProfiles IQ motif profile. 98 125 IPR000048 GO:0005515
Sebi780g00002 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 118 IPR027417 -
Sebi780g00002 146 ProSiteProfiles IQ motif profile. 74 102 IPR000048 GO:0005515
Sebi780g00002 146 SMART iq_5 73 95 IPR000048 GO:0005515
Sebi780g00002 146 SMART iq_5 96 117 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi780g00002 Sebi-Chr780 54662 55233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi780g00002 61 139 IQD Protein Family AT3G51380 70.886 2.78e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi780g00002 - - cam:101507643 195.667