Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00164 ATGGCACTTTCTGTTCACAGAGATTCATCAAACAAGCACATGGATTCTAGCAAGTATGTGAGGTACACACCCGAACAAGTGGAAGCTTTGGAGAGGGTATATGCAGAATGTCCAAAGCCTAGTTCTTCCAAAAGGCAACAGCTCATTAGGGAATGTCCCATCCTTGCTAATATTGAACCAAAACAGATCAAAGTGTGGTTTCAGAATCGCAGATGTAGAGAAAAGCAGCGCAAAGAATCAGTTCGTCTGCAGACAGTGAATAAAAAGCTGACTGCAATGAATAAGTTGCTAATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCACAGTTGGTTTATGAAAATGGATACATGAAACAACAAGTACAGACTGCATCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGCACCAACAGCCAATCCCAAAAACTCAGCATCCCCAGTGGGATGCTAACAACCCAGCTGGTCTTCTCGCAATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCAACTGGGTTCAAATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCTGCAATTGTAGTGGGGTAGCAGCACGAGCCTGTGGCCTTGTGAGCCTAGAGCCCACAAAGGTTGCCGAAATTCTTAAAGATCGTCCATCATGGTATCGTGACTGTCGATGCCTCAATGTATTGAGTATAGTCCCCACAGGGAATGGGGGCACAATAGAGCTCATGTACATGCAGACTTATGCACCAACAACACTGGCAGCAGCAAGAGACTTCTGGACACTAAGATACACAACAAGTTTGGAAGATGGAAGTCTTGTGATTTGCGAGAGATCCTTAACTTCTTCAAGTGGTGGCCCCACAGGGCCTTCTGCTTCAAACTTTGTAAGAGCTGAAATGCTTCCTAGTGGCTATCTAATTAGATCCTGTGAGGGTGGTGGATCTATTATTCACATTGTTGATCACGTTGATTTAGATGTTTGGAGTGTTCCTGAGGTATTGAGGCCCCTCTATGAATCATCAAAATTCTTGACTCAGAAATTGACTATTGCTGCCTTGCGACACATAAGACAGATTGCACAAGAATCAAATGGAGAAGTTCATTATGGTGGGGGACGTCAGCCTGCTGTCTTGAGGACATTTAGTCAGAGACTTTGCAGAGGATTCAATGATGCTATCAATGGATTTGTGGATGATGGTTGGTCACTGATGGGTAATGATGGGGTGGAAGATGTGACCATAGCCATAAACTCATCTCCGGACAAGTTTTTTGGCTCCCATTACAACACGTCAATGCTCTCAACATTTGGAGGTGGGATCCTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTCCTTTGCTTGTTCGATTTTTGAGGGAGCATCGTTCAGAGTGGGCTGATTATGGGGTTGATGCATACTCGGCTGCAAGTCTTAAGGCTAGTCCTTATGCAGTTCCTTGTACTAGACCTGTTGGCTTCCCCAGCAGCCAGGTCATTTTACCACTTGCTCAGACTGTTGAGCATGAGGAGTTTCTGGAGGTAGTTCGTATAGAAGGTCATGCATTTTCACCTGAAGATGTGGCTTTGGCACGTGATATGTATCTACTGCAGCTGTGCAGTGGAGTTGATGAAAATGCAATTGGAGCATGTGCGCAGCTTGTGTTTGCACCTATTGATGAATCATTTGCAGATGATGCTCTCTTACTGCCTTCTGGTTTCCGTGTCATACCATTGGATCCTAAAACAGGTGGTCCCACTGCGACTAGAACATTGGATTTGGCATCAACACTGGAAGTAGGATCTGGTAATGCTCGTCTAGCTGGTGAAGATGATTTGAATAACTACAACCTTAGGTCAGTCCTTACAATTGCATTCCAGTTTACCTTTGAGAACCATTTGCGAGACAATGTGGCTGCTATGGCTCGCCAATATGTGCGTAGTGTTGTGCGATCTGTTCAGAGGGTTGCCATGGCAATTTCTCCCTCTCCATTCACAACCCAGTTGGGGCCAAAATCACTTACCAGTCCACCAGAGGCTCTTACTTTAGCACGATGGATCTGTAGAAGCTACAGCTTTGCAAACCAAGCTGGACTTGACATGCTTGAAACCACTCTAGTTGCTCTTCAAGATATAATGCTCGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTCTGCTTTGAATTCTCCAAGATAATGCAACAGGGATTTGCATATCTGCCAGCAGGAATATGTGTGTCCAGTATGAATCGACCAGTGTCCTATGAGCAGGCCATTGCATGGAAAGTTCTGGATGACCATGATTCCAATCACTGCCTGGCCTTCATGTTCATGAACTGGTCTTTTGTCTGA 2409 0.4541 MALSVHRDSSNKHMDSSKYVRYTPEQVEALERVYAECPKPSSSKRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKESVRLQTVNKKLTAMNKLLMEENDRLQKQVSQLVYENGYMKQQVQTASATTTDNSCESVVMSGQHQQPIPKTQHPQWDANNPAGLLAIAEETLAEFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSCNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSSGGPTGPSASNFVRAEMLPSGYLIRSCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKFLTQKLTIAALRHIRQIAQESNGEVHYGGGRQPAVLRTFSQRLCRGFNDAINGFVDDGWSLMGNDGVEDVTIAINSSPDKFFGSHYNTSMLSTFGGGILCAKASMLLQNVPPPLLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCTRPVGFPSSQVILPLAQTVEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKTGGPTATRTLDLASTLEVGSGNARLAGEDDLNNYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVRSVQRVAMAISPSPFTTQLGPKSLTSPPEALTLARWICRSYSFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCFEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLDDHDSNHCLAFMFMNWSFV 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00164 802 Pfam START domain 166 373 IPR002913 GO:0008289
Sebi77g00164 802 SUPERFAMILY Homeodomain-like 17 79 IPR009057 -
Sebi77g00164 802 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Sebi77g00164 802 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Sebi77g00164 802 CDD homeodomain 18 78 IPR001356 GO:0003677
Sebi77g00164 802 Coils Coil 87 114 - -
Sebi77g00164 802 Gene3D - 195 377 IPR023393 -
Sebi77g00164 802 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Sebi77g00164 802 SMART START_1 165 375 IPR002913 GO:0008289
Sebi77g00164 802 CDD bZIP 70 109 - -
Sebi77g00164 802 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Sebi77g00164 802 Pfam MEKHLA domain 709 801 IPR013978 -
Sebi77g00164 802 SUPERFAMILY Bet v1-like 166 377 - -
Sebi77g00164 802 SMART HOX_1 15 81 IPR001356 GO:0003677
Sebi77g00164 802 CDD START_ArGLABRA2_like 160 376 - -
Sebi77g00164 802 Gene3D - 9 82 - -
Sebi77g00164 802 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 710 802 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00164 Sebi-Chr77 2190420 2196551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00164 5 802 Homeobox Transcription Factor Family AT2G34710 74.201 0.0 1282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi77g00164 START 2.1e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00164 K09338 - gmx:100807637 1405.58