Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00156 ATGCAGAAGCTAGTATGCTCGTTTGAAAAGGCACTTGAAACAGTAAAGTGGGAAGGTCCCGCGGGCGAGCGATCACATTCACAGCAGTCCTCAGCGGTTACACCCCAGATGTCAGAGTTGACGTCTTTGAGCTTTGAACACTCTGGCACTGTCAGAGGTTTAGATTTGTGGAGCTTTGAGTTTGATCAGAGTCCTTCCAGAAAGAGAAAGCGAAAGATAGACACTTGGACAAAACTGATTCGGGTTTCATCACCCGGAATGGGAGTGGAGGAGGTTCCTCCTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGATATTCTCGGAAGCAAATATCCAAGATCCTATTACAGATGCACTAACAAAATTGTATCTGGCTGCTTGGCCAAAAAGCAAGTGCAGAGATCTGAGGAGGACCCCACCATCTTGGAAATCACTTACAGAGAAGAGCACACCTGCAAAATGGACTCGAACATAAAAATTGAAGACCAATGCCCTGCTATATCAGGAATAAGTCACTTTTCGGTGTCTCCAAGTAGGGTGAACAGTTCTGTGTCTCAGATCAATATGATCCCAGCTGCTGCTTCAGCTCCAAACTCACCAATCGATGATTCAATGTTCAATTTGTTGGAGGACTTCCCAAATATGGAATAA 657 0.446 MQKLVCSFEKALETVKWEGPAGERSHSQQSSAVTPQMSELTSLSFEHSGTVRGLDLWSFEFDQSPSRKRKRKIDTWTKLIRVSSPGMGVEEVPPDDGYSWRKYGQKDILGSKYPRSYYRCTNKIVSGCLAKKQVQRSEEDPTILEITYREEHTCKMDSNIKIEDQCPAISGISHFSVSPSRVNSSVSQINMIPAAASAPNSPIDDSMFNLLEDFPNME 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00156 218 ProSiteProfiles WRKY domain profile. 89 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi77g00156 218 SMART WRKY_cls 94 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi77g00156 218 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 27 181 IPR044810 GO:0003700
Sebi77g00156 218 Gene3D WRKY domain 86 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi77g00156 218 Pfam WRKY DNA -binding domain 95 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi77g00156 218 SUPERFAMILY WRKY DNA-binding domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00156 Sebi-Chr77 2085985 2086988 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00156 66 154 WRKY Transcription Factor Family AT4G11070 58.427 3.18e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi77g00156 WRKY 2.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00156 - - gmx:100812027 158.688