Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00139 ATGCCTCGTAAAGTAAACTATGGACTCGATTACTATGACGACGACTATGACGACTATGATTACGAAGACTATGGAGAAGGACCCAATACAAAGCAAGAGACCACTAAGCCTGGACTTTGGCGATGCTCCATTTGCACTTATGACAACGATGAGAGTATGACTTCGTGCGATATTTGTGGTGTTTTACGTCATCCCTCGGTTTACATTGGAACTTCCTGCAATAACAAAACAGATGCTTTTAAGTTTGACGTTCCATCCCCAGATGATGTGGTTTATTCTGGCTTACATTCTTCCAAAATGGGTTTGAAAGACAAAGTTACAAACTCTAAAACTTCTCGGCTTTCATCAAGCATCAAAGAGAAGAACGATTTTTCTATACAATCAAATGCTGAAAGTTCAGACATATCATCCTTAGTGCGAAAGAGCGGGAAGGGTAGTTCGGCTAACAACAAGCTTTCCAAAAATGTAGAAAGTAATCTGGAAACAGTTGGTAAAACTTCAAACAGCTTACCGGCATCTTTGTCAAAGGACAGAGGTGACAATATGAATAAAATAAATTCTTCTGAAAGTGGTACAATTGATGTTCAATCAAGCAAAGAAAAATCAGGTAGTTTGTCTTCATTGCCAAAAGTCAAAGAAAGTGATGAGATTAGTTCCTCTTCTATCAAAGATGGAAAACCTGAAAGTGTTTCTAGCAGTTTTAACAACATGCATCTTAATGTAAGATCTGGAAATTCTGATAGTACTAATGCTAAGGGACCTTGTTCACAAGTTTCTTATAAGCCAGAAAAATGGATGCTCCCTCAACATGCTGAAGATACATTGACTCAGCTGAATCTTGCAATTGTTGGTCATGTTGATTCTGGAAAATCAACACTGTCCGGTAGGTTATTACACCTATCAGGACGAATTTCCCAGAAAGAAATGCACAAATATGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCCTTTGCATATGCTTGGGCACTTGATGAAAGTTCAGAAGAAAGGGAAAGGGGAATAACTATGACTGTTGCTGTTGCATATTTTGACACTAGGAAATATCATGTAGTTGTGCTTGACTCCCCGGGCCATAAAGATTTCGTCCCAAACATGATTTCTGGGGCAACTCAAGCTGATGCTGCAGTTCTTGTTATAGATGCCTCACTTGGTTCATTTGAAGCTGGTATGGATGGTAGCAAAGGACAAACGAGGGAACATGCACAACTTATTAGAAGCTTTGGTGTTGACCAGGTTATAGTTGCAGTAAATAAGATGGATGTTGTGGCATACTCCAAAGATCGATTTGATTTTATAAGACAGCAGTTAGGAATTTTTCTCCGCTCATGTGGATTCAAAGATTCATCTATAAAATGGATTCCCATGAGTGCCATGGAAAATCAAAATTTGGTGGCATCCCCTTCTGATATTCGTTTCAAAAACTGGTATAGTGGACCTTATCTGTTAGATGCAATTGACTCACTCCAACCTCCTACTAGAGAATTCTCAAAACCTCTACTAATGCCGATATGTGATGTTATCAAATCAACTACACTAGGACAGGTGTCGGCTTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTAGTTATGCCTTCAGCTGTTGTGGGAACAGTACGCTCATTGGAGCGTGACTCTAATGCCTGCACTGTTGCAAGAGCTGGAGATAACGTAGCTGTGACGTTGCATGGTGTTGATGGAAGTCTTGTAATGGCAGGAGGTGTACTATGCCATCCTGACTTTCCTGTTGCAGTTTCAAAGCATTTGGAGTTGAAAGTGCTTGTCTTGGATGGTGCGAGTCCCATATTGGTGGGCGCTCAGTTAGAGTTTCATATACACCATGCAAAGGAACCTGCTAGAGTTTCAAGAATAGTGTCAGTACTTGATCCCAAGACTGGTAAGGTGACCAAAAAGTCCCCTCGTTGTCTCACTGCAAAGCAAAGTGCAGTAATTGAGGTGATTTTGCAAGAGCCAGTCTGTGTGGTAGAGTTCTCTAGTTGTAAAGCTCTTGGAAGGGTGTCCCTCAGATCATTTGGAAGAACAATCGCTGTTGGACTTGTGTCAAGAATAATTGAAGAGTAA 2115 0.409 MPRKVNYGLDYYDDDYDDYDYEDYGEGPNTKQETTKPGLWRCSICTYDNDESMTSCDICGVLRHPSVYIGTSCNNKTDAFKFDVPSPDDVVYSGLHSSKMGLKDKVTNSKTSRLSSSIKEKNDFSIQSNAESSDISSLVRKSGKGSSANNKLSKNVESNLETVGKTSNSLPASLSKDRGDNMNKINSSESGTIDVQSSKEKSGSLSSLPKVKESDEISSSSIKDGKPESVSSSFNNMHLNVRSGNSDSTNAKGPCSQVSYKPEKWMLPQHAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLSGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTRKYHVVVLDSPGHKDFVPNMISGATQADAAVLVIDASLGSFEAGMDGSKGQTREHAQLIRSFGVDQVIVAVNKMDVVAYSKDRFDFIRQQLGIFLRSCGFKDSSIKWIPMSAMENQNLVASPSDIRFKNWYSGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSTTLGQVSACGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLHGVDGSLVMAGGVLCHPDFPVAVSKHLELKVLVLDGASPILVGAQLEFHIHHAKEPARVSRIVSVLDPKTGKVTKKSPRCLTAKQSAVIEVILQEPVCVVEFSSCKALGRVSLRSFGRTIAVGLVSRIIEE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00139 704 Gene3D - 30 67 - -
Sebi77g00139 704 MobiDBLite consensus disorder prediction 223 255 - -
Sebi77g00139 704 MobiDBLite consensus disorder prediction 129 215 - -
Sebi77g00139 704 CDD HBS1_C_III 593 701 - -
Sebi77g00139 704 CDD EF1_alpha 279 498 - -
Sebi77g00139 704 FunFam Elongation factor 1 alpha-like protein 268 499 - -
Sebi77g00139 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 277 520 IPR027417 -
Sebi77g00139 704 MobiDBLite consensus disorder prediction 129 255 - -
Sebi77g00139 704 FunFam elongation factor 1-alpha isoform X4 596 704 - -
Sebi77g00139 704 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 275 506 IPR000795 GO:0003924|GO:0005525
Sebi77g00139 704 PANTHER TRANSLATION FACTOR 274 701 - -
Sebi77g00139 704 Pfam Elongation factor Tu GTP binding domain 278 494 IPR000795 GO:0003924|GO:0005525
Sebi77g00139 704 Pfam Elongation factor Tu C-terminal domain 596 701 IPR004160 -
Sebi77g00139 704 FunFam Translation elongation factor EF-1 502 592 - -
Sebi77g00139 704 SUPERFAMILY Translation proteins 497 592 IPR009000 -
Sebi77g00139 704 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 598 702 IPR009001 -
Sebi77g00139 704 ProSitePatterns Zinc finger RanBP2-type signature. 40 59 IPR001876 -
Sebi77g00139 704 ProSiteProfiles Zinc finger RanBP2 type profile. 36 65 IPR001876 -
Sebi77g00139 704 SMART zf_4 38 62 IPR001876 -
Sebi77g00139 704 PRINTS GTP-binding elongation factor signature 358 368 IPR000795 GO:0003924|GO:0005525
Sebi77g00139 704 PRINTS GTP-binding elongation factor signature 374 385 IPR000795 GO:0003924|GO:0005525
Sebi77g00139 704 PRINTS GTP-binding elongation factor signature 419 428 IPR000795 GO:0003924|GO:0005525
Sebi77g00139 704 PRINTS GTP-binding elongation factor signature 279 292 IPR000795 GO:0003924|GO:0005525
Sebi77g00139 704 PRINTS GTP-binding elongation factor signature 338 346 IPR000795 GO:0003924|GO:0005525
Sebi77g00139 704 Gene3D Translation factors 596 704 - -
Sebi77g00139 704 Gene3D Translation factors 503 592 - -
Sebi77g00139 704 Gene3D - 266 499 IPR027417 -
Sebi77g00139 704 SUPERFAMILY Ran binding protein zinc finger-like 37 63 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00139 Sebi-Chr77 1866960 1876211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00139 38 704 Eukaryotic Initiation Factors Gene Family AT5G10630 61.435 0.0 811