Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00126 ATGAAAAATAAGGGATGGCTGGAATTTGCAGAATCCAAACTACCCCAGGATGAGGTTAATGCCCTTAAAGAAATCACTAGTACGATGGGTGCCACCTATTGGAATTTTGATAGTGATTCTTGTCAAATTAAAATGGTGGGGTTGACACCAGAGCCACCTGATGGATCTAAAAGCAGCATCGATTGTGATTGCTCTTCTGAAAATGACACCTTCTGTCATGTAGTAAGGATTATGTTCAAGGGGTACAACCTTCCTGGCATGCTTCCACCTCAATTGGTTAAGCTTCCTTACCTCAGAGAAATTGATTTTGCTTTAAACTACCTAAATGGGACGATTCCAAAGGAATGGGCTTCAATGAAATTAACTTTTATCTCTCTATTTGTTAATCGTTTATCAGGAGAAATTCCTATCGAGCTGGGAAATATCTCCACTCTCACATACCTGAACCTTGAAGCGAACCAATTTTCTGGCGATGTTCCCTCTGAACTTGGAAATCTATTTAACCTGCAGACTTTGATTTTATCATCCAATAAGTTGCTTGGGAACTTACCAGTGACATTTGCTCAGTTACAGAATTTGACAGATTTTAGGATAAATGATAATAGTTTCGAAGGAAAAATACCTAGCTTCATACAGAATTGGAAACAACTTCATAGACTAGAAATGCATGCAACTGGACTGGAGGGACCTATCCCATCAAATATATCTCTTTTGACTAATTTATCTCAACTGAGGATTAGTGATGTAAATAGTCCAAGTCAGGATTTTCCTAATTTAAGCAACATGACAGGAATGATAAAATTGATTTTGAGAAATTGTAATATTACTGGAGAGCTTCCTACCTACTTCTGGACTATGAAGAGTTTGGAGATGTTGGATCTCAGTTTCAATAATTTGGTTGGGGAAATACCAGAAACTATACATGTGGGGCATCTGAGATTCCTCTTCCTAACTGGCAACAAGCTAAGTGGTGATGTACCTGCCTCAATCTTGATGGATGGAAGCAATGTTGATCTTTCATACAACAACTTTACGTGGCAAGGACCTGAGAGACCTGCTTGTGGAGATCACCTGAATTTAAACCTAAACTTGTTCCGGAGCTCCTCAGGGATCAATGAATTACAGGGGATTCTTCCATGTTCAAAAACATTCAACTGTCCTAGATATTCAAGTTGTCTGCATGTTAATTGTGGTGGAAACGATATACAGGTGAGGGGAAATGATGAAAATATCCTCTATGTAGGAGATGGAGACGTGGTTGGTGGTGCTGCTAAATATTTTAATGATTATAATAATTACTGGGGCTTTAGTAGCACTGGGGACTTCATGGATGATGGTGATTACCAAAATTTACGTTACACCAGGTCTTTATCATCTTCAAGTTTGCCTGAAATATATACAACGGCTCGTGTCTCTCCGATTTTGCTTACTTATTTTCACTATTGCTTGGAAAATGGGAAATATACTGTAAATCTCCACTTTGCAGAAATAATATTTACAAATGATAACACATCTAGAAGTCTTGGGAGGCGCTTATTTGATATCTATGTTCAGGAAAGGTTAATTTGGAAGGATTTTAATATTGAAGGTGAAACACACGCTGCTCAAAAACCACGCATAATATCAATTCATAATGTCACTGTAACAGACAATATTCTGGAGATTCGATTCTATTGGGCTGGCAAGGGGACTACAAGGATTCTTCCTGTTGGCAGTGTTTATGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTGATTCTAAACCTTGTTCAGACCGAAATAGTGGAAGGCATAAAATAGTCATTGGAGTTGGATTTGGAGTTTCAGCTCTATGCCTAGTCCTCATTATAGTAGGAATCTTTTGGAGGAAAGGCTGCATGAAAGGAATAATTAGAACACAAAGAGGTACTGAAGGGCAAGATTTTCAGATGAGGACATTTACCTTAAAGCAAATTAGAGATGCCACAGATGACTTCAGTCCTGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAATTATCTGATGGTACATGGATAGCAGTCAAACAACTCTCATCAAAGTCGCGGCAGGGAAACCGTGAATTTTTGAATGAGATAGGCATGATATCATGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATGTTGCATTGAAGGGGATCAATTAATATTGGTGTATGAGTACATGGAAAATAATAGCCTGGCCTATGCTTTATTCAGCTCAAAAAATCAGCATAATCTGGATTGGCCTACAAGGCTTAGGATCTGCATTGGCATAGCAAAAGGTCTTGCATTTCTTCATGAAGAATCAAGGCTCAAGATTGTTCATCGAGATATCAAAGCTACTAATGTGTTACTGGATGGGAATTTAAATCCTAAAATATCTGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAGAAGACCCATATCATCACCCGAGTGGCTGCGCCATCACTTAGGCCTACAATGTCTGAGGTTGTAAACATTCTTGAAGGAAGAACAAACATTCCAGATGTTATCCCAGAACAAAGTGTTCTCAGTGAAGATTTAAGGTTTAAATCCATGAGGGACATCCATCAACAGAGGGAAAATCACAGCTTGAGCACAAGTCAAACAGACAATTCAACAGGAGTCCTTACACGTAGCTCTCCCTAA 2673 0.3902 MKNKGWLEFAESKLPQDEVNALKEITSTMGATYWNFDSDSCQIKMVGLTPEPPDGSKSSIDCDCSSENDTFCHVVRIMFKGYNLPGMLPPQLVKLPYLREIDFALNYLNGTIPKEWASMKLTFISLFVNRLSGEIPIELGNISTLTYLNLEANQFSGDVPSELGNLFNLQTLILSSNKLLGNLPVTFAQLQNLTDFRINDNSFEGKIPSFIQNWKQLHRLEMHATGLEGPIPSNISLLTNLSQLRISDVNSPSQDFPNLSNMTGMIKLILRNCNITGELPTYFWTMKSLEMLDLSFNNLVGEIPETIHVGHLRFLFLTGNKLSGDVPASILMDGSNVDLSYNNFTWQGPERPACGDHLNLNLNLFRSSSGINELQGILPCSKTFNCPRYSSCLHVNCGGNDIQVRGNDENILYVGDGDVVGGAAKYFNDYNNYWGFSSTGDFMDDGDYQNLRYTRSLSSSSLPEIYTTARVSPILLTYFHYCLENGKYTVNLHFAEIIFTNDNTSRSLGRRLFDIYVQERLIWKDFNIEGETHAAQKPRIISIHNVTVTDNILEIRFYWAGKGTTRILPVGSVYGPLISAFSIVSDSKPCSDRNSGRHKIVIGVGFGVSALCLVLIIVGIFWRKGCMKGIIRTQRGTEGQDFQMRTFTLKQIRDATDDFSPANKIGEGGFGPVYKGQLSDGTWIAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLILVYEYMENNSLAYALFSSKNQHNLDWPTRLRICIGIAKGLAFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLARLDEEEKTHIITRVAAPSLRPTMSEVVNILEGRTNIPDVIPEQSVLSEDLRFKSMRDIHQQRENHSLSTSQTDNSTGVLTRSSP 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00126 890 Pfam Protein tyrosine and serine/threonine kinase 663 814 IPR001245 GO:0004672|GO:0006468
Sebi77g00126 890 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 734 - -
Sebi77g00126 890 Gene3D Ribonuclease Inhibitor 178 253 IPR032675 -
Sebi77g00126 890 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 390 586 - -
Sebi77g00126 890 MobiDBLite consensus disorder prediction 865 890 - -
Sebi77g00126 890 Gene3D - 390 588 - -
Sebi77g00126 890 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 821 - -
Sebi77g00126 890 FunFam Os07g0541700 protein 735 823 - -
Sebi77g00126 890 Pfam Malectin domain 392 581 IPR021720 -
Sebi77g00126 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 184 250 - -
Sebi77g00126 890 ProSiteProfiles Protein kinase domain profile. 659 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00126 890 SMART serkin_6 659 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00126 890 Gene3D Phosphorylase Kinase; domain 1 628 734 - -
Sebi77g00126 890 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 20 183 - -
Sebi77g00126 890 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 252 373 - -
Sebi77g00126 890 MobiDBLite consensus disorder prediction 870 890 - -
Sebi77g00126 890 Gene3D Transferase(Phosphotransferase) domain 1 735 822 - -
Sebi77g00126 890 Gene3D Ribonuclease Inhibitor 16 177 IPR032675 -
Sebi77g00126 890 Gene3D Ribonuclease Inhibitor 254 354 IPR032675 -
Sebi77g00126 890 SUPERFAMILY L domain-like 60 328 - -
Sebi77g00126 890 SUPERFAMILY Protein kinase-like (PK-like) 642 817 IPR011009 -
Sebi77g00126 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00126 Sebi-Chr77 1683175 1701633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00126 13 822 Receptor kinase-like Gene Family AT1G29750 62.145 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi77g00126 Malectin 3.2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00126 - - mtr:11406167 1345.87