Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00122 ATGGCTAATGACTCAGCAAGAATTGAAACACATGAAGTTGTTTTAAATGTAAATAAGGATGTCTCCAAAACACATGAAGGCTCAGACACCTATGTCCCTTTCTTGCAGAAGTTGGTAGCTGAGGTGGTGGGCACATATTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACAAGGGCTACGACAATGTGGTGACACTTACTGGGATTTCAATTGTTTGGGGACTGGTTGTGATGGTTATGGTTTACTCTCTTGGTCATATCTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCACCACCAAAAGGTTTCCATGGATTCAGGTACCAGCTTACATAGCAGCTCAGCTGATTGGAGCCACACTTGCAAGTGGAACTCTGAAACTGATATTTAGTGGGAGCCATGACAAGTTTCCAGGAACACTTCCAGCTGGATCTACCATGCAAGCTTTTTGGGTTGAATTCATAATAACTTTTTACCTTATGTTTGTCATATCCGGGGTTGCTACTGATAACAGAGCGATTGGTGAGTTGGCTGGTCTTGCAATTGGGTCTACAGTACTGCTGAATGTGATGATTGCAGGGCCGGTGACAGGAGGATCAATGAACCCAGTGAGAAGCCTAGGACCTGCTTTTCTACACAGTGAATACAGAGGAATATGGATATACTTGGTGTCACCGCTTCTGGGGGCGGTGGCCGGAGCATGGGTCTATAACATTGTTAGGTTCACGGACAAGCCATTGCGTGAGATCACCAAGAGTGCCTCTTTCCTCAAAGCAACAGGGCGTGATGGCACCAAGTAA 816 0.4583 MANDSARIETHEVVLNVNKDVSKTHEGSDTYVPFLQKLVAEVVGTYFLIFAGCASVVVNKGYDNVVTLTGISIVWGLVVMVMVYSLGHISGAHFNPAVTIAFATTKRFPWIQVPAYIAAQLIGATLASGTLKLIFSGSHDKFPGTLPAGSTMQAFWVEFIITFYLMFVISGVATDNRAIGELAGLAIGSTVLLNVMIAGPVTGGSMNPVRSLGPAFLHSEYRGIWIYLVSPLLGAVAGAWVYNIVRFTDKPLREITKSASFLKATGRDGTK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00122 271 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Sebi77g00122 271 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 Pfam Major intrinsic protein 32 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi77g00122 271 Gene3D Glycerol uptake facilitator protein. 2 257 IPR023271 -
Sebi77g00122 271 PANTHER AQUAPORIN NIP2-1 22 262 IPR034294 -
Sebi77g00122 271 SUPERFAMILY Aquaporin-like 31 256 IPR023271 -
Sebi77g00122 271 CDD MIP 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00122 Sebi-Chr77 1659804 1661700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00122 1 264 Major Intrinsic Protein MIP AT5G37810 55.515 5.52e-107 310