Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00110 ATGGGAAGCCAAGAGGTGAAGCTTGTGAGCTTTTGGGTGAGTCCTTTTGCTAAAAGGGTTGAGTGGGCCTTGAAACTTAAGGGTATTGATTTTGAGTATATAGAAGAAGATGTCTTCAACAAAAGTAGTCTCCTTTTGGAGTTGAACCCGGTTCACAAGAAGGTGCCAGTTCTTGTCCATGCCCAGAAATCCATTGCTGAGTCATTCATTATCCTTGAATACATTGATGAAACATGGAACCAATATCCACTTTTGCCTCACCATCCTTATCAAAGAGCTCTTGCTCGCTTTTGGGCTAATTTTGGTGAACAAATTCTTTTGAGTCAAGTATCGATTGCAATGTGTGGCAGCGGGGATGAAAAGGAAAAGGCTGTGAGTGGAGCCAAAGAAGCAATGGAGAAAATAGAAGAGGAGATTAAGGGGAAGAAATTCTTTGGAGGGGACAATATTGGGTACCTTGACCTTGCACTTGGATGGATTTCTTATTTGATTCCTGTTTTGGAGGAAGTTGGGTTTATGCAAATAATAGACCCATTGACATGTCCAGCAATCACTACATGGATGACCAATTTTCTCAACCACCCTGTGATCAAGGACAGCTTGCCCCCAAGAGACAAGATGCTTGTTTACTTTCAAGGTTTCATGGCTGGTTTAATAAGGTCTAGATCCATGTCATAA 678 0.4174 MGSQEVKLVSFWVSPFAKRVEWALKLKGIDFEYIEEDVFNKSSLLLELNPVHKKVPVLVHAQKSIAESFIILEYIDETWNQYPLLPHHPYQRALARFWANFGEQILLSQVSIAMCGSGDEKEKAVSGAKEAMEKIEEEIKGKKFFGGDNIGYLDLALGWISYLIPVLEEVGFMQIIDPLTCPAITTWMTNFLNHPVIKDSLPPRDKMLVYFQGFMAGLIRSRSMS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00110 225 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Sebi77g00110 225 Gene3D - 85 218 - -
Sebi77g00110 225 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Sebi77g00110 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Sebi77g00110 225 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Sebi77g00110 225 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Sebi77g00110 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Sebi77g00110 225 FunFam Tau class glutathione S-transferase 85 221 - -
Sebi77g00110 225 FunFam Tau class glutathione S-transferase 1 87 - -
Sebi77g00110 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Sebi77g00110 225 CDD GST_N_Tau 6 79 - -
Sebi77g00110 225 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Sebi77g00110 225 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Sebi77g00110 225 Coils Coil 118 138 - -
Sebi77g00110 225 Gene3D Glutaredoxin 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00110 Sebi-Chr77 1480411 1481567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00110 2 218 Glutathione S-transferase Gene Family AT2G29420 42.661 9.01e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00110 K00799 - tpra:123914566 353.599