Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00085 ATGGCTGACCACAACCATAAGGAGATGTCTGCTTCTGTTATCAATGGGAATGATTCCCTCACTGGTCACATCATATCCACTACAATTGGAGGAAAAAATGGGGAGCCAAAACAGACTATAAGTTACATGGCAGAACGCGTTGTAGGGACTGGGTCATTTGGAGTTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAGGCAGTGGCTATTAAGAAGGTTTTACAGGACAGAAGATATAAAAATCGTGAGCTACAGTTAATGCGCATGATGGATCATCCAAATGTGATCTCTCTGAAGCATTGTTTCTTTTCGACTACAAGTACAGATGAGCTTTTTCTTAATTTGGTGATGGAATATGTTCCGGAGTCTATGTATCGAGTCTTGAAGTTCTATAGTAATTCTAATCAAAGAATGCCACTTATCTACGTAAAACTTTATATGTACCAGATTTTCAGGGGCCTGGCTTATATCCACACTGTACCTGGAGTATGCCACAGAGATTTGAAGCCTCAAAATATACTGGTTGACCCTCTTACACACCAGGTTAAGATATGTGATTTTGGAAGTGCAAAGGTTTTGGTCAAAGGTGAAGCTAATATATCATATATATGTTCGCGCTTCTATCGGGCTCCAGAACTTATATTTGGTGCCACTGAGTATACCACTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTGCTTTTGGGCCAGCCATTGTTTCCTGGCGAAAATGCTGTGGACCAGCTTGTAGAGATTATCAAGGTTCTTGGCACACCCACTCGGGAGGAAGTCCGCTGCATGAATCCAAACTACAATGACTTCAGATTTCCACAGGTTAAAGCACACCCATGGCACAAGATATTCCACAAAAAAATGCCTCCAGAAGCAATTGATCTAGCTTCCCGGCTTCTGCAGTACTCCCCAAGTCTCCGCTGTACTGCGCTAGAAGCATGTGCACACCCATTCTTTGATGAACTCCGTGAACCCAATGCTCGCTTGCCAAATGGTCGTCCATTTCCACCTCTATTCAACTTTAAACAAGATTTATCTGGAGCATCTCCAGAGCTTGTTAACAAGTTGATACCTGACCACATGAAGCGGCAGATTGGGTTACAAAATGCCCATTTGGCAGGAACATGA 1149 0.4308 MADHNHKEMSASVINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNVISLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKFYSNSNQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKICDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEVRCMNPNYNDFRFPQVKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQDLSGASPELVNKLIPDHMKRQIGLQNAHLAGT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00085 382 Gene3D Transferase(Phosphotransferase) domain 1 122 369 - -
Sebi77g00085 382 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
Sebi77g00085 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Sebi77g00085 382 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 371 - -
Sebi77g00085 382 Pfam Protein kinase domain 42 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00085 382 FunFam Glycogen synthase kinase-3 beta 26 121 - -
Sebi77g00085 382 SUPERFAMILY Protein kinase-like (PK-like) 41 350 IPR011009 -
Sebi77g00085 382 CDD STKc_GSK3 37 329 IPR039192 -
Sebi77g00085 382 ProSiteProfiles Protein kinase domain profile. 42 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00085 382 FunFam Shaggy-related protein kinase kappa 122 369 - -
Sebi77g00085 382 Gene3D Phosphorylase Kinase; domain 1 27 121 - -
Sebi77g00085 382 SMART serkin_6 42 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00085 Sebi-Chr77 1169071 1173473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00085 46 364 MAP Kinase Gene Family AT3G59790 35.928 1.53e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sebi77g00085 Pkinase 1.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00085 K14502 - gmx:100779909 740.725